BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019442
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   127   3e-27
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   127   4e-27
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   122   2e-25
emb|CBI23311.3| unnamed protein product [Vitis vinifera]              118   2e-24
ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumi...   118   2e-24

>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  127 bits (320), Expect = 3e-27
 Identities = 82/179 (45%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
 Frame = -1

Query: 872 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 711
           MAL  + GS  K G       +E+   F  V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGGD------EELGLGFAPV--TRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 710 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHF 537
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 536 AYHTPSSKTASLKSFRIVDDEYFNSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 360
           AY TPS            +   F+   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDE 171


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  127 bits (319), Expect = 4e-27
 Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = -1

Query: 872 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 711
           MAL  + GS  K G        + +   G V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGG--------DEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 710 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHF 537
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 536 AYHTPSSKTASLKSFRIVDDEYFNSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 360
           A+ TPS            +   F+   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AFSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDE 171


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  122 bits (305), Expect = 2e-25
 Identities = 77/172 (44%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
 Frame = -1

Query: 815 DFDEMDKDFGVVRCTGAFGRKRVEPSPC------SSPFRTPLKRQCSVK----------- 687
           D DE  K  G VR T +FGRKR+  S         SP +TPLKR CS++           
Sbjct: 18  DSDEAFKRLGCVRYTRSFGRKRIVISNAVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKR 77

Query: 686 ---LNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWHFAYHTPSS 516
              L  +KS LE LPQDILVR+LC V HDDL++L +VS +IR+ATL+A+  HFAY TP  
Sbjct: 78  LCSLEPEKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRK 137

Query: 515 KTASLKSFRIVDD-EYFNSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSP 363
             A        ++   F+    PNAP   + + SR   +NL DISVALF SP
Sbjct: 138 IPAFRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFASP 189


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  118 bits (296), Expect = 2e-24
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -1

Query: 719 RTPLKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKN 546
           RTPLKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL++L +VS +IRDATLIAK 
Sbjct: 308 RTPLKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKK 367

Query: 545 WHFAYHTPSSKTASLKSFRIVDDEYFNSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHS 366
            HFAY TPS            +   F+   TP+AP   +   SR +GR LS I++ALF S
Sbjct: 368 SHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSS 427

Query: 365 PE 360
            E
Sbjct: 428 DE 429


>ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumis sativus]
          Length = 190

 Score =  118 bits (295), Expect = 2e-24
 Identities = 78/180 (43%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
 Frame = -1

Query: 872 MALQMKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 711
           MAL  K G L      +  D      DFGVVR T   GRKRV      E SP     + P
Sbjct: 1   MALGKKTGCLKSKSVVSAAD---KGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAP 57

Query: 710 LKRQCSV---KLNFDKSLLEALPQDILVRILCGVEHDDLEKLQYVSRSIRDATLIAKNWH 540
            KR+C+V    +  D+SLLEALPQ+IL+R+LCGVEHDDL++L  VS++I +ATLIAK+ H
Sbjct: 58  SKRRCNVVSTAVEDDRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSH 117

Query: 539 FAYHTPSSKTASLKSFRIVDDEYFNSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 360
           FAY TPS       +  + D   F+    PNA  P +   +    + L++IS+ALF   E
Sbjct: 118 FAYSTPSKVRRFRTAIELDDSSDFDEIEAPNA-CPTRRFRTPLNRKKLAEISIALFAEEE 176