BLASTX nr result

ID: Coptis25_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019440
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19373.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002889792.1| hypothetical protein ARALYDRAFT_471130 [Arab...    81   1e-13
ref|XP_002510065.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|NP_563862.1| protein PHLOEM protein 2-LIKE A10 [Arabidopsis ...    75   7e-12
gb|AAM63523.1| unknown [Arabidopsis thaliana]                          75   7e-12

>emb|CBI19373.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 KLDAKSNEGEES--GRVLDKLFSTAGTGFASVIVGSFARNLVMAFYSGDGNTSSSEEQKW 38
           K DA++  G+ S    ++++LFS+AGTGFASV+VGSFARNLVM FY+ DG    S   KW
Sbjct: 23  KNDAQTRSGDSSFSDSIMERLFSSAGTGFASVVVGSFARNLVMGFYARDG-AEVSTAPKW 81

Query: 37  ISVICNDKCKEL 2
           ++V+C DKCK L
Sbjct: 82  VNVVCGDKCKPL 93


>ref|XP_002889792.1| hypothetical protein ARALYDRAFT_471130 [Arabidopsis lyrata subsp.
           lyrata] gi|297335634|gb|EFH66051.1| hypothetical protein
           ARALYDRAFT_471130 [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 14/85 (16%)
 Frame = -2

Query: 214 YKLDAKSNEGEESG-------RVLDKLFSTAGTGFASVIVGSFARNLVMAFYSGD----- 71
           YK ++ SN   +SG        VLDK+FS AGTGF SV+VGSFA+NLV+ FYSG      
Sbjct: 101 YKSESSSNNVGDSGIEKKSESSVLDKVFSEAGTGFVSVVVGSFAKNLVLGFYSGKLESGV 160

Query: 70  --GNTSSSEEQKWISVICNDKCKEL 2
               + SSE  KW++++C+DKC+EL
Sbjct: 161 KCEGSDSSETPKWVNLLCDDKCREL 185


>ref|XP_002510065.1| conserved hypothetical protein [Ricinus communis]
           gi|223550766|gb|EEF52252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
 Frame = -2

Query: 172 RVLDKLFSTAGTGFASVIVGSFARNLVMAFYSGDG------NTSSSEEQKWISVICNDKC 11
           +V+D++FS AGTGFASV+VGSFARNLV+ FYS  G       ++ S+  KW+ V+C+D+C
Sbjct: 144 KVMDRVFSKAGTGFASVVVGSFARNLVLGFYSNVGAGVDQSRSNLSDLPKWVGVVCDDRC 203

Query: 10  KEL 2
           KEL
Sbjct: 204 KEL 206


>ref|NP_563862.1| protein PHLOEM protein 2-LIKE A10 [Arabidopsis thaliana]
           gi|75213370|sp|Q9SY57.1|P2A10_ARATH RecName:
           Full=Protein PHLOEM PROTEIN 2-LIKE A10; Short=AtPP2-A10
           gi|4914317|gb|AAD32865.1|AC005489_3 F14N23.3
           [Arabidopsis thaliana] gi|94807671|gb|ABF47131.1|
           At1g10150 [Arabidopsis thaliana]
           gi|110740734|dbj|BAE98466.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190426|gb|AEE28547.1|
           protein PHLOEM protein 2-LIKE A10 [Arabidopsis thaliana]
          Length = 414

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 KSNEGEESGRVLDKLFSTAGTGFASVIVGSFARNLVMAFYSGD-------GNTSSSEEQK 41
           KS++     RV+DK+FS AGTGF SV+VGSFA+NLV+ FYSG          + SSE  +
Sbjct: 137 KSSDSSVVDRVIDKVFSEAGTGFVSVVVGSFAKNLVLGFYSGKVESGVKCEGSDSSETPR 196

Query: 40  WISVICNDKCKEL 2
           W++++ +DKC+EL
Sbjct: 197 WVTLLGDDKCREL 209


>gb|AAM63523.1| unknown [Arabidopsis thaliana]
          Length = 414

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 KSNEGEESGRVLDKLFSTAGTGFASVIVGSFARNLVMAFYSGD-------GNTSSSEEQK 41
           KS++     RV+DK+FS AGTGF SV+VGSFA+NLV+ FYSG          + SSE  +
Sbjct: 137 KSSDSSVVDRVIDKVFSEAGTGFVSVVVGSFAKNLVLGFYSGKVESGVKCEGSDSSETPR 196

Query: 40  WISVICNDKCKEL 2
           W++++ +DKC+EL
Sbjct: 197 WVTLLGDDKCREL 209


Top