BLASTX nr result

ID: Coptis25_contig00019436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019436
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269218.1| PREDICTED: putative zinc metalloprotease slr...    72   6e-11
ref|XP_003527499.1| PREDICTED: putative zinc metalloprotease slr...    64   2e-08
ref|XP_002301619.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003540837.1| PREDICTED: putative zinc metalloprotease slr...    62   6e-08
ref|XP_002529666.1| Protease ecfE, putative [Ricinus communis] g...    59   4e-07

>ref|XP_002269218.1| PREDICTED: putative zinc metalloprotease slr1821-like isoform 2
           [Vitis vinifera]
          Length = 426

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = -3

Query: 291 STSPLTRLLNTSKSPNTHFSKSLCSSISYQ------KTHYTKECFFQKKSV----KKDSF 142
           S SP++ L      P TH SKSL SSI Y        + ++K  FF +KS     K+ +F
Sbjct: 22  SKSPISEL---GLKPRTHVSKSLSSSICYSFCSSSNLSFHSKNHFFCEKSRYPHGKRGNF 78

Query: 141 KAWAIPGFDIGSFXXXXXXXXXXXXXXXXIFVHESGHFLAAYLQGIH 1
           ++WA+ GFD GS                 I VHESGHFLAAYLQGIH
Sbjct: 79  RSWAMAGFDFGSLESAQSVVEAAAVLTAIIIVHESGHFLAAYLQGIH 125


>ref|XP_003527499.1| PREDICTED: putative zinc metalloprotease slr1821-like [Glycine max]
          Length = 410

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 48/118 (40%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
 Frame = -3

Query: 306 MTLNLSTSP--------LTRLLNTSKSP--------NTHFSKSLCSSISYQKTHYTKECF 175
           M +NLS SP        + RL N SKSP         THF K L S  S   T   K  F
Sbjct: 1   MVVNLSPSPSPPLHSSSIIRLAN-SKSPISEPWLRLKTHFPKPLLSPTSVNFT-CNKNQF 58

Query: 174 FQKKSVKKDSFKAWAIPGFDIGSFXXXXXXXXXXXXXXXXIFVHESGHFLAAYLQGIH 1
              K+  +  F+ W+I GFD G+F                I VHESGHFLAA LQGIH
Sbjct: 59  LHGKNRNRLDFRTWSIAGFDYGNFEGPQSVLEAAAVLTAIIVVHESGHFLAASLQGIH 116


>ref|XP_002301619.1| predicted protein [Populus trichocarpa] gi|222843345|gb|EEE80892.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
 Frame = -3

Query: 306 MTLNLSTSPLTRL--LNTSKSP----------NTHFSKSLCSSISYQKT---HYTKECFF 172
           ++ +LS SP + L   + SKSP           THF K L SS+ Y      H     F 
Sbjct: 5   LSSSLSPSPSSSLPRFSNSKSPILESSSLKRKTTHFFKPLSSSLCYSSNLNFHSKTPLFT 64

Query: 171 QKKSVKKDSFKAWAIPGFDIGSFXXXXXXXXXXXXXXXXIFVHESGHFLAAYLQGIH 1
           +    K+  F++WA+ GFD+G+F                  VHE GHFLAAYLQGIH
Sbjct: 65  RCPLGKRLDFRSWAVSGFDLGNFESVLEAVGVLTAIIV---VHEGGHFLAAYLQGIH 118


>ref|XP_003540837.1| PREDICTED: putative zinc metalloprotease slr1821-like [Glycine max]
          Length = 411

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 48/118 (40%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
 Frame = -3

Query: 306 MTLNLSTSP------LTRLLNTSKSP--------NTHFSKSLCS-SISYQKTHYT-KECF 175
           M +NLS SP      + RL N SKSP         THF K L S S +    ++T K+ F
Sbjct: 1   MVVNLSPSPPLHSSSIIRLAN-SKSPISEPWLRLKTHFPKPLLSPSFASPSVNFTCKKQF 59

Query: 174 FQKKSVKKDSFKAWAIPGFDIGSFXXXXXXXXXXXXXXXXIFVHESGHFLAAYLQGIH 1
               S     F+ W+I GFD G+F                I VHESGHFLAA LQGIH
Sbjct: 60  LHGNSRNVLDFRTWSIAGFDYGNFEGPQSVLEAAAVLTAIIVVHESGHFLAASLQGIH 117


>ref|XP_002529666.1| Protease ecfE, putative [Ricinus communis]
           gi|223530846|gb|EEF32708.1| Protease ecfE, putative
           [Ricinus communis]
          Length = 447

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
 Frame = -3

Query: 300 LNLSTSPLTRLLNTSKSPNTHFSKSLCSSI--SYQKTHYTKECFFQKKSV-------KKD 148
           L  + S  + +++ S  P +HFS+ L S +  S   +H +   F  KK V       K+ 
Sbjct: 12  LRFTNSDKSPIIDASLRPKSHFSEPLFSPLTSSLPSSHLSLH-FHSKKHVFGRYPLGKRL 70

Query: 147 SFKAWAIPGFDIGSFXXXXXXXXXXXXXXXXIFVHESGHFLAAYLQGIH 1
            F++WA+ GFD  +F                  VHESGHFLAAYLQGIH
Sbjct: 71  DFRSWAVSGFDFSNFESVLEAASVLTAII---IVHESGHFLAAYLQGIH 116


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