BLASTX nr result

ID: Coptis25_contig00019423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019423
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267...   169   2e-40
emb|CBI28665.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical p...   151   5e-35
ref|NP_001030933.1| SET domain-containing protein [Arabidopsis t...   151   5e-35

>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
          Length = 561

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = +1

Query: 10  EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLALTPM 189
           EEAK++   QWLQ+N+VELRGC+IK+C  NKGFG+FY ND   S+G+ LVVPLDLA+TPM
Sbjct: 5   EEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITPM 62

Query: 190 SVLEDATLGPKCRAMFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLP 339
            VL+D  LGP+CRAMF++G+VDDR L+ILFLTVERLRKNS+WKPYLDMLP
Sbjct: 63  RVLQDPFLGPECRAMFEEGEVDDRLLMILFLTVERLRKNSSWKPYLDMLP 112


>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = +1

Query: 10  EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLALTPM 189
           EEAK++   QWLQ+N+VELRGC+IK+C  NKGFG+FY ND   S+G+ LVVPLDLA+TPM
Sbjct: 5   EEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITPM 62

Query: 190 SVLEDATLGPKCRAMFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLP 339
            VL+D  LGP+CRAMF++G+VDDR L+ILFLTVERLRKNS+WKPYLDMLP
Sbjct: 63  RVLQDPFLGPECRAMFEEGEVDDRLLMILFLTVERLRKNSSWKPYLDMLP 112


>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/99 (71%), Positives = 89/99 (89%)
 Frame = +1

Query: 43  LQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLALTPMSVLEDATLGPK 222
           +Q+NKVELRGC IK+CG NKGFG+F +NDV  S+GV+LVVPLDLA+TPM VL+D  +GP+
Sbjct: 1   IQVNKVELRGCNIKYCGQNKGFGVFSSNDV--SDGVLLVVPLDLAITPMRVLQDPLIGPE 58

Query: 223 CRAMFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLP 339
           CR+MF++G+VDDRFL+ILFL +ERLR NS+WKPYLDMLP
Sbjct: 59  CRSMFEEGEVDDRFLMILFLMLERLRNNSSWKPYLDMLP 97


>gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical protein gi|6983878 from Oryza
           Sativa BAC gb|AP001168 [Arabidopsis thaliana]
          Length = 441

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/111 (64%), Positives = 87/111 (78%)
 Frame = +1

Query: 7   EEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLALTP 186
           EEEAK+E    WLQ+N  ELRGC IK+    KGFG+F +     S+ V+LVVPLDLA+TP
Sbjct: 5   EEEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITP 64

Query: 187 MSVLEDATLGPKCRAMFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLP 339
           M VL+D  LGP+C+ MF+QG VDDRFL+ILFLT+ERLR NS+WKPYLDMLP
Sbjct: 65  MRVLQDPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLP 115


>ref|NP_001030933.1| SET domain-containing protein [Arabidopsis thaliana]
           gi|63003834|gb|AAY25446.1| At1g01920 [Arabidopsis
           thaliana] gi|332189233|gb|AEE27354.1| SET
           domain-containing protein [Arabidopsis thaliana]
          Length = 547

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/111 (64%), Positives = 87/111 (78%)
 Frame = +1

Query: 7   EEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLALTP 186
           EEEAK+E    WLQ+N  ELRGC IK+    KGFG+F +     S+ V+LVVPLDLA+TP
Sbjct: 5   EEEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITP 64

Query: 187 MSVLEDATLGPKCRAMFQQGDVDDRFLIILFLTVERLRKNSAWKPYLDMLP 339
           M VL+D  LGP+C+ MF+QG VDDRFL+ILFLT+ERLR NS+WKPYLDMLP
Sbjct: 65  MRVLQDPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLP 115


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