BLASTX nr result
ID: Coptis25_contig00019402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019402
(1553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat... 463 e-128
emb|CBI28440.3| unnamed protein product [Vitis vinifera] 460 e-127
emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera] 460 e-127
ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|2... 454 e-125
ref|XP_002268022.1| PREDICTED: putative protein FAR1-RELATED SEQ... 437 e-120
>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 463 bits (1191), Expect = e-128
Identities = 227/452 (50%), Positives = 303/452 (67%), Gaps = 10/452 (2%)
Frame = +2
Query: 224 LKMALMKSQTVGGGGVSCWIRRQQCPCGXXXXXXXXXXXXXXXXQVHXXXXXXXXXXNNK 403
LKMA+ S + WIRRQQCPCG Q ++
Sbjct: 1043 LKMAMKPSNNI-------WIRRQQCPCGDWKCYIKYEGDD----QTSANSQLVKSETSSS 1091
Query: 404 GKDNVEVSPPYVGQVFETDDEAFDYYRNFARKNGFAIRRESSRSTEDRGVYIRVYACHRY 583
+ V PYVGQ+F++DDEAF+YY NFARKNGF+IR+ S +++ G+Y R + C+R
Sbjct: 1092 SLASEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRS 1151
Query: 584 GPERIXXXXXXXXXXXXXXCACGCEARMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEV 763
G + CGC+A++Y+ K++V G +W V QF N HNHELLED++V
Sbjct: 1152 GFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQV 1211
Query: 764 RYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCK 943
R LPAYRKI ++D+ERIL + K G V I++VL+ +KG PG LPFI++DVRNF+++CK
Sbjct: 1212 RLLPAYRKIQEADQERILLLSKAGFPVNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCK 1271
Query: 944 KI----------DRGNDVSELLDICKTVRETDPEFLFDYTMDENAKLENITWSYGNSVRA 1093
K R ND ELL+ CK + E DP+F++D+TMD N K+ENI WSYGNSV A
Sbjct: 1272 KTVQENDALLTEKRENDTLELLETCKALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHA 1331
Query: 1094 YKLFGDVVVFDATYREISYDRLLGVWFGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQ 1273
Y +FGDVV FD TYR I+Y LLGVWFGIDN+GK IFFGCVLL++ET+QS+AWALQ F++
Sbjct: 1332 YSVFGDVVAFDTTYRSITYGLLLGVWFGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVR 1391
Query: 1274 FMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSE 1453
FM+ R PQTILTD+D L+DAI++ +P TKHV C+WHI+SKL SWFS PLG ++ +FKS+
Sbjct: 1392 FMRGRRPQTILTDIDSGLRDAITSELPNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQ 1451
Query: 1454 FERLYNLDTKKDFECQWNQMVTRFAFGSNKHI 1549
F+ L L++ +DFE QW+ +V +F S+KHI
Sbjct: 1452 FDILCRLESIEDFEHQWHHLVAQFGLVSDKHI 1483
>emb|CBI28440.3| unnamed protein product [Vitis vinifera]
Length = 1355
Score = 460 bits (1184), Expect = e-127
Identities = 222/434 (51%), Positives = 296/434 (68%), Gaps = 10/434 (2%)
Frame = +2
Query: 278 WIRRQQCPCGXXXXXXXXXXXXXXXXQVHXXXXXXXXXXNNKGKDNVEVSPPYVGQVFET 457
WIRRQQCPCG Q ++ + V PYVGQ+F++
Sbjct: 10 WIRRQQCPCGDWKCYIKYEGDD----QTSANSQLVKSETSSSSLASEVVFTPYVGQIFKS 65
Query: 458 DDEAFDYYRNFARKNGFAIRRESSRSTEDRGVYIRVYACHRYGPERIXXXXXXXXXXXXX 637
DDEAF+YY NFARKNGF+IR+ S +++ G+Y R + C+R G +
Sbjct: 66 DDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRK 125
Query: 638 XCACGCEARMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERIL 817
CGC+A++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL
Sbjct: 126 SVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERIL 185
Query: 818 SMYKTGCSVRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDV 967
+ K G V I++VL+ +KG PG LPFI++DVRNF+++CKK R ND
Sbjct: 186 LLSKAGFPVNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDT 245
Query: 968 SELLDICKTVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREIS 1147
ELL+ CK + E DP+F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+
Sbjct: 246 LELLETCKALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSIT 305
Query: 1148 YDRLLGVWFGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVL 1327
Y LLGVWFGIDN+GK IFFGCVLL++ET+QS+AWALQ F++FM+ R PQTILTD+D L
Sbjct: 306 YGLLLGVWFGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGL 365
Query: 1328 KDAISNSMPYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWN 1507
+DAI++ +P TKHV C+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+
Sbjct: 366 RDAITSELPNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWH 425
Query: 1508 QMVTRFAFGSNKHI 1549
+V +F S+KHI
Sbjct: 426 HLVAQFGLVSDKHI 439
>emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]
Length = 692
Score = 460 bits (1184), Expect = e-127
Identities = 222/434 (51%), Positives = 296/434 (68%), Gaps = 10/434 (2%)
Frame = +2
Query: 278 WIRRQQCPCGXXXXXXXXXXXXXXXXQVHXXXXXXXXXXNNKGKDNVEVSPPYVGQVFET 457
WIRRQQCPCG Q ++ + V PYVGQ+F++
Sbjct: 10 WIRRQQCPCGDWKCYIKYEGDD----QTSANSQLVKSETSSSSLASEVVFTPYVGQIFKS 65
Query: 458 DDEAFDYYRNFARKNGFAIRRESSRSTEDRGVYIRVYACHRYGPERIXXXXXXXXXXXXX 637
DDEAF+YY NFARKNGF+IR+ S +++ G+Y R + C+R G +
Sbjct: 66 DDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHPRDRK 125
Query: 638 XCACGCEARMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERIL 817
CGC+A++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL
Sbjct: 126 SVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERIL 185
Query: 818 SMYKTGCSVRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDV 967
+ K G V I++VL+ +KG PG LPFI++DVRNF+++CKK R ND
Sbjct: 186 LLSKAGFPVNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDT 245
Query: 968 SELLDICKTVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREIS 1147
ELL+ CK + E DP+F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+
Sbjct: 246 LELLETCKALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSIT 305
Query: 1148 YDRLLGVWFGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVL 1327
Y LLGVWFGIDN+GK IFFGCVLL++ET+QS+AWALQ F++FM+ R PQTILTD+D L
Sbjct: 306 YGLLLGVWFGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGL 365
Query: 1328 KDAISNSMPYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWN 1507
+DAI++ +P TKHV C+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+
Sbjct: 366 RDAITSELPNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWH 425
Query: 1508 QMVTRFAFGSNKHI 1549
+V +F S+KHI
Sbjct: 426 HLVAQFGLVSDKHI 439
>ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|222861970|gb|EEE99512.1|
predicted protein [Populus trichocarpa]
Length = 686
Score = 454 bits (1167), Expect = e-125
Identities = 216/435 (49%), Positives = 294/435 (67%), Gaps = 10/435 (2%)
Frame = +2
Query: 278 WIRRQQCPCGXXXXXXXXXXXXXXXXQVHXXXXXXXXXXNNKGKDNVEVSPPYVGQVFET 457
WIRRQQCPCG ++ V PYVGQ+F++
Sbjct: 8 WIRRQQCPCGDWKCYIKYEGDDQTSASSQLG--------RSETTSTELVFTPYVGQIFKS 59
Query: 458 DDEAFDYYRNFARKNGFAIRRESSRSTEDRGVYIRVYACHRYGPERIXXXXXXXXXXXXX 637
DD+AF+YY NFARKNGF+IR+ S ++ G+Y R + C+R G +
Sbjct: 60 DDDAFEYYSNFARKNGFSIRKARSTESQHLGIYRRDFVCYRSGFNQPRKKANVEHPRDRK 119
Query: 638 XCACGCEARMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERIL 817
CGC+A++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL
Sbjct: 120 SIRCGCDAKLYLTKEIVDGLAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERIL 179
Query: 818 SMYKTGCSVRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDV 967
+ K G + I+KVL+L+KG PG+ PFI++DVRNF+++CKK R ND
Sbjct: 180 LLSKAGFPINRIVKVLELEKGVQPGHFPFIEKDVRNFVRTCKKTVQENDALLTEKRENDT 239
Query: 968 SELLDICKTVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREIS 1147
ELL+ CK+V E DP+F +DYT DEN K+ENI W YG+SVRAY L+GDVV FD TYR I+
Sbjct: 240 LELLEACKSVAERDPDFAYDYTTDENQKVENIAWLYGDSVRAYTLYGDVVTFDTTYRSIT 299
Query: 1148 YDRLLGVWFGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVL 1327
Y LLGVWFG+DN+GK I +GCVLL++E++ S+ WALQ F++F++ R+PQTI+TD++L L
Sbjct: 300 YGLLLGVWFGMDNHGKAILYGCVLLQDESSHSFTWALQTFVRFIKGRHPQTIITDMELAL 359
Query: 1328 KDAISNSMPYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWN 1507
+DAI+ +P TKHV CIWHI+SKL SW SFPLG+RFE+FK+EF+ L + + +DFE QWN
Sbjct: 360 RDAIARELPNTKHVVCIWHILSKLSSWLSFPLGSRFEDFKAEFDLLCHEENVEDFEHQWN 419
Query: 1508 QMVTRFAFGSNKHIS 1552
+V RF ++KH++
Sbjct: 420 LLVARFELVTDKHMA 434
>ref|XP_002268022.1| PREDICTED: putative protein FAR1-RELATED SEQUENCE 10-like [Vitis
vinifera]
Length = 843
Score = 437 bits (1123), Expect = e-120
Identities = 217/441 (49%), Positives = 286/441 (64%), Gaps = 14/441 (3%)
Frame = +2
Query: 272 SCWIRRQQCPCGXXXXXXXXXXXXXXXXQVHXXXXXXXXXXNNKGKDNV----EVSPPYV 439
S W RRQQCPCG H + K N + PYV
Sbjct: 8 SIWYRRQQCPCGDWKCYI-----------THEGDVEEPSMTSQLAKYNTMSTEAMVAPYV 56
Query: 440 GQVFETDDEAFDYYRNFARKNGFAIRRESSRSTEDRGVYIRVYACHRYGPERIXXXXXXX 619
G VF++D++AF+YY NFARKNGF+IR+E SR + GVY R + C+R G
Sbjct: 57 GMVFKSDEDAFEYYGNFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPARKKPTGE 116
Query: 620 XXXXXXXCACGCEARMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDS 799
CGC+A+MY+ K++V G +W V QF N HNHELLED++VR LPAYRKI +
Sbjct: 117 HHRDRKSVRCGCDAKMYLSKEVVDGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEV 176
Query: 800 DRERILSMYKTGCSVRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI---------- 949
D+ERIL + K G I+KVL+++KG G LPF++RDVRNF+Q+ K++
Sbjct: 177 DQERILLLSKAGFPTHRIVKVLEMEKGIQGGQLPFLERDVRNFIQNRKRVVQENDALLSE 236
Query: 950 DRGNDVSELLDICKTVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDA 1129
R ND +ELL+ CK +E D F++D+T+DE+ K+ENI WSYG SV AY +F DVV FD
Sbjct: 237 KRENDTTELLEACKATKEADENFVYDFTVDESDKVENIAWSYGESVHAYNVFSDVVYFDT 296
Query: 1130 TYREISYDRLLGVWFGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILT 1309
TYR I+Y L G WFGIDN+GK +FFGCVLL++ET +S+AWALQ F+QFM+ R PQ I+T
Sbjct: 297 TYRSITYGMLFGAWFGIDNHGKTVFFGCVLLQDETHRSFAWALQTFVQFMKGRPPQAIIT 356
Query: 1310 DLDLVLKDAISNSMPYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKD 1489
DLD L+DAI + +P TKHV +W+I++KL SWFS PLG ++ EFKSEFE LY L+ +
Sbjct: 357 DLDPGLRDAIRSELPTTKHVISVWNILAKLSSWFSLPLGLQYAEFKSEFEALYCLEVPDE 416
Query: 1490 FECQWNQMVTRFAFGSNKHIS 1552
F+ +WNQMV+RF S+KHI+
Sbjct: 417 FDLRWNQMVSRFGLSSDKHIA 437