BLASTX nr result

ID: Coptis25_contig00019398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019398
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...    89   4e-16
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...    88   8e-16
ref|XP_002323426.1| hypothetical protein POPTRDRAFT_256578 [Popu...    87   1e-15
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...    80   1e-13

>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 14/107 (13%)
 Frame = +1

Query: 1   LESYKKFLPGEDVNALFYRTTW--GTKKQLDDYNQVRSILESHQIVIEERDIGWS----- 159
           L+ ++K  P    NA+   TT   G +K  +D N VRSILESH I + ERDI        
Sbjct: 241 LDLFEKKCPPGGANAVVIYTTTLRGIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKE 300

Query: 160 -------WNEIDVPILFVKGKLIGGADEVIKLEKEGTLRILFDGIPK 279
                    E+ VP++FVKG+LIGGADEV+KLE+EG L ILFDGIP+
Sbjct: 301 ELRGLMGTKEVKVPLVFVKGRLIGGADEVVKLEEEGKLDILFDGIPR 347


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 14/107 (13%)
 Frame = +1

Query: 1   LESYKKFLP--GEDVNALFYRTTWGTKKQLDDYNQVRSILESHQIVIEERDIGWS----- 159
           L+S+++  P  GE+   ++  T  G +K  +D N  RSI+ESH I I ERD+        
Sbjct: 249 LQSFEQKCPPGGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKE 308

Query: 160 -------WNEIDVPILFVKGKLIGGADEVIKLEKEGTLRILFDGIPK 279
                    E+ VP++FVKG+LIGGAD+V+KLE+EG L ILFDGIP+
Sbjct: 309 ELRRLMGTKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGIPR 355


>ref|XP_002323426.1| hypothetical protein POPTRDRAFT_256578 [Populus trichocarpa]
           gi|222868056|gb|EEF05187.1| hypothetical protein
           POPTRDRAFT_256578 [Populus trichocarpa]
          Length = 144

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 12/90 (13%)
 Frame = +1

Query: 46  LFYRTTWGTKKQLDDYNQVRSILESHQIVIEERDIGWS------------WNEIDVPILF 189
           ++  T  G +K  +D N VRSI+ESH I I ERD+                NE+ VP++F
Sbjct: 3   IYTTTLRGIRKTFEDCNTVRSIIESHHIHIVERDVSMDSGFKEELRGLMGTNEVKVPLVF 62

Query: 190 VKGKLIGGADEVIKLEKEGTLRILFDGIPK 279
           VKG+LIGGAD+V+KLE EG L ILFDGIPK
Sbjct: 63  VKGRLIGGADQVVKLEVEGKLEILFDGIPK 92


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 14/107 (13%)
 Frame = +1

Query: 1   LESYKKFLP--GEDVNALFYRTTWGTKKQLDDYNQVRSILESHQIVIEERDIGWS----- 159
           L+S+++  P  GE+   L+  T  G +K  +D N VRSI+ESH I + ERDI        
Sbjct: 269 LQSFEQKCPPGGENAVVLYTTTLRGIRKTFEDCNTVRSIIESHHIHMLERDISMDSGLKE 328

Query: 160 -------WNEIDVPILFVKGKLIGGADEVIKLEKEGTLRILFDGIPK 279
                     + VP++FVKG+LIGGAD+V+KLE+EG L ILFDGIP+
Sbjct: 329 ELRRLMGTKVVKVPLVFVKGRLIGGADQVVKLEEEGKLGILFDGIPR 375


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 13/102 (12%)
 Frame = +1

Query: 25  PGEDVNALFYRTTW-GTKKQLDDYNQVRSILESHQIVIEERDIGWSWN------------ 165
           PG + + + Y TT  G +K  +D N+VRSI+ES+ I + ERD+                 
Sbjct: 248 PGGETSVVIYTTTLRGIRKTFEDCNKVRSIVESYGIHVVERDVSMDSGFKEELRALMGSK 307

Query: 166 EIDVPILFVKGKLIGGADEVIKLEKEGTLRILFDGIPKKRGA 291
           E+ VP +FVKG+LIGGA EV+K+E+EG L +LF+GIP   G+
Sbjct: 308 EVKVPAVFVKGRLIGGAAEVLKMEEEGKLGVLFEGIPTAAGS 349


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