BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019395
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   134   1e-29
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...   128   7e-28
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   124   1e-26
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...   120   1e-25
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   119   4e-25

>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  134 bits (338), Expect = 1e-29
 Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 27/190 (14%)
 Frame = -1

Query: 493 MAFFRNFTNGIDINTVMDDEE-GEDFG-VGNRLGNEYVNGSLSEKDVQLRI--------- 347
           MAFFRNF N    +  M+D+  G+D   +   +GNEY +G+ SEK+  + +         
Sbjct: 1   MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSSEKEFDMNLEAQYESDGG 60

Query: 346 -------------DDAEGSR-GDIQGSGVRTNMVGKWGSSFWKDCQPMYNPREAATESGR 209
                        DD +G R  ++Q SG + + VG+WGS+FWKDCQP  +  +   ESG+
Sbjct: 61  PDDACRLQNEGTADDRDGLRESNLQASGSKASTVGRWGSTFWKDCQP--SCPQNGFESGK 118

Query: 208 ESKILDSDYKSDEGSEDNNSLDDMNGRLES--GDCEKDGDDVQRSPADVPAEEMLSDDYY 35
           ESK   SDYK+  GSEDN S+D   GRL+S   D +K+    +RS +DVPAEEMLSD+YY
Sbjct: 119 ESKS-GSDYKNAGGSEDN-SVDGETGRLDSEDDDGQKEVGKGRRSHSDVPAEEMLSDEYY 176

Query: 34  EQDGDDQSDS 5
           EQDG+DQSDS
Sbjct: 177 EQDGEDQSDS 186


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223529287|gb|EEF31257.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 1718

 Score =  128 bits (322), Expect = 7e-28
 Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 23/186 (12%)
 Frame = -1

Query: 493 MAFFRNFTNGIDINTVMDDEEGEDFGVGNRLGNEYVNGSLSEKDVQLRIDDAEGSRGDIQ 314
           MAFFRN++N    ++V++D+ G+   +G  +G+E +    SE++  + +D    S G+  
Sbjct: 1   MAFFRNYSNQTVSHSVLEDK-GQGHRIGRMVGSEDIEVIASEREFDMNVDAQYESEGEDA 59

Query: 313 G----------SGV-----------RTNMVGKWGSSFWKDCQPMYNPREAATESGRESKI 197
           G           GV           R N  GKWGSSFWKDCQP+    + A++S  +SK 
Sbjct: 60  GRTEGDAAPDNGGVSVSNSYLQPPGRRNEAGKWGSSFWKDCQPL--GAQGASDSAHDSK- 116

Query: 196 LDSDYKSDEGSEDNNSLDDMNGRLESGDCE--KDGDDVQRSPADVPAEEMLSDDYYEQDG 23
             SDYK  EGSEDN S D  +G LES D E  KD +  Q+  +DVPA+EMLSD+YYEQDG
Sbjct: 117 --SDYKIAEGSEDNMS-DGRDGTLESEDEEGQKDLNKGQKGQSDVPADEMLSDEYYEQDG 173

Query: 22  DDQSDS 5
           +DQSDS
Sbjct: 174 EDQSDS 179


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  124 bits (312), Expect = 1e-26
 Identities = 81/190 (42%), Positives = 114/190 (60%), Gaps = 27/190 (14%)
 Frame = -1

Query: 493 MAFFRNFTNGIDINTVMDDE-EGEDFG-VGNRLGNEYVNGSLSEKDVQLRIDDAEGSRGD 320
           MAFFRNF+N    + VM+D+ +G++   V   +GN+  + + SEK+  + ++    S G+
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE 60

Query: 319 IQGS-----------------------GVRTNMVGKWGSSFWKDCQPMYNPREAATESGR 209
             GS                       G +T MVG+WGS+FWKDC  M +P+  + ESG+
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQM-DPQNGS-ESGQ 118

Query: 208 ESKILDSDYKSDEGSEDNNSLDDMNGRLESGDCE--KDGDDVQRSPADVPAEEMLSDDYY 35
           ESK   SDY++ +GSEDN SLD   GRL+S D +  K+     R  +DVPAEEMLSD+YY
Sbjct: 119 ESKS-GSDYRNADGSEDN-SLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYY 176

Query: 34  EQDGDDQSDS 5
           EQDG++QSDS
Sbjct: 177 EQDGEEQSDS 186


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score =  120 bits (302), Expect = 1e-25
 Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 24/187 (12%)
 Frame = -1

Query: 493 MAFFRNFTNGIDINTVMDDE-EGEDFG-VGNRLGNEYVNGSLSEKDVQLRIDDAEGSRGD 320
           MAFFRN++N     +V+D++ +G++   V + + NEYV+ + SEKD + ++D    S GD
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD 60

Query: 319 ----------------------IQGSGVRTNMVGKWGSSFWKDCQPMYNPREAATESGRE 206
                                 +Q SG RT M GKWGS+FWKDCQPM +   + +E   +
Sbjct: 61  TNDAGLQNEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNGSESEQDSK 120

Query: 205 SKILDSDYKSDEGSEDNNSLDDMNGRLESGDCEKDGDDVQRSPADVPAEEMLSDDYYEQD 26
            +    D K++E  EDN+S    +GR        + D VQ+   DVPA+EM SDDYYEQD
Sbjct: 121 CRF---DCKNEEALEDNSS----DGR--------EVDKVQKGQNDVPADEMSSDDYYEQD 165

Query: 25  GDDQSDS 5
           G+DQSDS
Sbjct: 166 GEDQSDS 172


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  119 bits (298), Expect = 4e-25
 Identities = 79/190 (41%), Positives = 113/190 (59%), Gaps = 27/190 (14%)
 Frame = -1

Query: 493 MAFFRNFTNGIDINTVMDDE-EGEDFG-VGNRLGNEYVNGSLSEKDVQLRIDDAEGSRGD 320
           MAFFRNF+N    + VM+D+ +G++   V   +GN+  + + SEK+  + ++    S G+
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGE 60

Query: 319 IQGS-----------------------GVRTNMVGKWGSSFWKDCQPMYNPREAATESGR 209
             GS                       G +T MVG+WGS+FWKDC  M +P+  + ESG+
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQM-DPQNGS-ESGQ 118

Query: 208 ESKILDSDYKSDEGSEDNNSLDDMNGRLESGDCE--KDGDDVQRSPADVPAEEMLSDDYY 35
           ESK   SDY++ +GSEDN SLD    R++S D +  K+     R  +DVPAEEMLSD+YY
Sbjct: 119 ESKS-GSDYRNADGSEDN-SLDGRVVRVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYY 176

Query: 34  EQDGDDQSDS 5
           EQDG++QSDS
Sbjct: 177 EQDGEEQSDS 186