BLASTX nr result

ID: Coptis25_contig00019391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019391
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    99   4e-19
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    98   8e-19
ref|NP_001190749.1| uncharacterized protein [Arabidopsis thalian...    96   2e-18
emb|CAB10506.1| hypothetical protein [Arabidopsis thaliana] gi|7...    96   2e-18
ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana] ...    96   2e-18

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/127 (41%), Positives = 73/127 (57%)
 Frame = +3

Query: 3   VPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKRWLPCKSFKLNSL 182
           +P+IG+Y+A AS++C L M  D+  GF                   K W PCK F LN+ 
Sbjct: 21  LPLIGIYVAVASLICGLAMAADLIHGFRH----------------RKFWFPCKFFSLNAT 64

Query: 183 TLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLWA 362
           +LT + +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+   ++   NL A
Sbjct: 65  SLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMA 124

Query: 363 LTIFVFT 383
           L I V T
Sbjct: 125 LGILVIT 131


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/127 (41%), Positives = 72/127 (56%)
 Frame = +3

Query: 3   VPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKRWLPCKSFKLNSL 182
           +P IG+Y+A AS++C L M  D+  GF                   K W PCK F LN+ 
Sbjct: 21  LPSIGIYVAVASLICGLAMAADLIHGFRH----------------RKFWFPCKFFSLNAT 64

Query: 183 TLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLWA 362
           +LT + +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+   ++   NL A
Sbjct: 65  SLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMA 124

Query: 363 LTIFVFT 383
           L I V T
Sbjct: 125 LGILVIT 131


>ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332658470|gb|AEE83870.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 647

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/127 (40%), Positives = 71/127 (55%)
 Frame = +3

Query: 3   VPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKRWLPCKSFKLNSL 182
           +P IG+Y+A AS++C + M  D+  GF                   K W PCK F LN+ 
Sbjct: 18  LPSIGVYVAAASLICGVAMFSDLLHGFRH----------------RKFWFPCKFFSLNAT 61

Query: 183 TLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLWA 362
           TLT + +  KL +DL TSMPS++DQL+KL+ + F+C  MA  +PSLG     +   NL A
Sbjct: 62  TLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLTA 121

Query: 363 LTIFVFT 383
           L I V T
Sbjct: 122 LGILVIT 128


>emb|CAB10506.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268477|emb|CAB78728.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 605

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/127 (40%), Positives = 71/127 (55%)
 Frame = +3

Query: 3   VPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKRWLPCKSFKLNSL 182
           +P IG+Y+A AS++C + M  D+  GF                   K W PCK F LN+ 
Sbjct: 18  LPSIGVYVAAASLICGVAMFSDLLHGFRH----------------RKFWFPCKFFSLNAT 61

Query: 183 TLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLWA 362
           TLT + +  KL +DL TSMPS++DQL+KL+ + F+C  MA  +PSLG     +   NL A
Sbjct: 62  TLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLTA 121

Query: 363 LTIFVFT 383
           L I V T
Sbjct: 122 LGILVIT 128


>ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana]
           gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w
           [Arabidopsis thaliana] gi|23506021|gb|AAN28870.1|
           At4g17250/dl4660w [Arabidopsis thaliana]
           gi|332658469|gb|AEE83869.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 741

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/127 (40%), Positives = 71/127 (55%)
 Frame = +3

Query: 3   VPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKRWLPCKSFKLNSL 182
           +P IG+Y+A AS++C + M  D+  GF                   K W PCK F LN+ 
Sbjct: 18  LPSIGVYVAAASLICGVAMFSDLLHGFRH----------------RKFWFPCKFFSLNAT 61

Query: 183 TLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLWA 362
           TLT + +  KL +DL TSMPS++DQL+KL+ + F+C  MA  +PSLG     +   NL A
Sbjct: 62  TLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLTA 121

Query: 363 LTIFVFT 383
           L I V T
Sbjct: 122 LGILVIT 128


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