BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019384
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...    71   8e-11
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...    70   1e-10
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...    65   4e-09
ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   1e-08

>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1509

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8   QKPSSNTSA--GPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDNVSKSQKAKRLRTVY 181
           +KP S+TS+  GP+LQIS ENE               QP     +N+SK+QKAKRL+ VY
Sbjct: 13  KKPQSSTSSSSGPRLQISAENENRLRRLLLNSNRST-QPTPPVQENLSKAQKAKRLKNVY 71

Query: 182 EKLSVEGFTSDQIETSLSALNE 247
           EKLS EGF++DQIE +L++L +
Sbjct: 72  EKLSCEGFSNDQIELALTSLKD 93


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
           gi|297739540|emb|CBI29722.3| unnamed protein product
           [Vitis vinifera]
          Length = 1458

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 11  KPSSNTSAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDN-VSKSQKAKRLRTVYEK 187
           K  S TSAGPKLQIS ENE                      D+ +SK+QKAK+LR+VYEK
Sbjct: 18  KSKSQTSAGPKLQISAENENRLRRLLLNSGRSGPASSPAPADDTLSKAQKAKKLRSVYEK 77

Query: 188 LSVEGFTSDQIETSLSALNE 247
           LS EGF++D IE +LSAL E
Sbjct: 78  LSCEGFSNDHIELALSALKE 97


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = +2

Query: 11  KPSSNTSAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTI--DNVSKSQKAKRLRTVYE 184
           K  +   +GPKLQIS ENE               +P T T   D ++K+QKAK+L+ VYE
Sbjct: 7   KQKAKAQSGPKLQISAENENRLRRLLLNSA----RPTTATAADDTLTKAQKAKKLKAVYE 62

Query: 185 KLSVEGFTSDQIETSLSALNE 247
           KLS EGF + QIE SLSAL E
Sbjct: 63  KLSCEGFGNHQIELSLSALRE 83


>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +2

Query: 11  KPSSNTSAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTT--IDNVSKSQKAKRLRTVYE 184
           K +S++++GP+LQIS ENE                  T T   +++SK+QKAK+L+ +YE
Sbjct: 19  KSNSSSNSGPRLQISAENENRLRRLLLNSTTTPPLQTTVTDNTNSLSKAQKAKKLKNIYE 78

Query: 185 KLSVEGFTSDQIETSLSALNE 247
           KLS EGF++D IE +LS+L +
Sbjct: 79  KLSCEGFSNDHIELALSSLKD 99


>ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226815 [Cucumis sativus]
          Length = 844

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = +2

Query: 26  TSAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDNVSKSQKAKRLRTVYEKLSVEGF 205
           +S+GPKL IS ENE                 VT   D++SK QK K+L+ VYEKLS EGF
Sbjct: 32  SSSGPKLNISAENETRLRRLLLSSGRSTPS-VTPADDSLSKVQKVKKLKAVYEKLSCEGF 90

Query: 206 TSDQIETSLSALNE 247
           T+DQIE +LSA+ +
Sbjct: 91  TNDQIELALSAIGD 104