BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019383
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...    72   5e-11
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...    70   2e-10
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...    67   1e-09
ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    67   2e-09
ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...    67   2e-09

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
           gi|297739540|emb|CBI29722.3| unnamed protein product
           [Vitis vinifera]
          Length = 1458

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
 Frame = +2

Query: 2   QPQKPSSSNA------SAGPKLQISTENE-QXXXXXXXXXXXXXXQPVTTTIDTVSKSQK 160
           Q  KPSSS +      SAGPKLQIS ENE +                     DT+SK+QK
Sbjct: 8   QQNKPSSSKSKSKSQTSAGPKLQISAENENRLRRLLLNSGRSGPASSPAPADDTLSKAQK 67

Query: 161 AKRLRTVYEKLSVEGFTSDQIETSLSALNE 250
           AK+LR+VYEKLS EGF++D IE +LSAL E
Sbjct: 68  AKKLRSVYEKLSCEGFSNDHIELALSALKE 97


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1509

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = +2

Query: 8   QKP-SSSNASAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDTVSKSQKAKRLRTVY 184
           +KP SS+++S+GP+LQIS ENE               QP     + +SK+QKAKRL+ VY
Sbjct: 13  KKPQSSTSSSSGPRLQISAENENRLRRLLLNSNRST-QPTPPVQENLSKAQKAKRLKNVY 71

Query: 185 EKLSVEGFTSDQIETSLSALNED 253
           EKLS EGF++DQIE +L++L ++
Sbjct: 72  EKLSCEGFSNDQIELALTSLKDN 94


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = +2

Query: 23  SNASAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTI--DTVSKSQKAKRLRTVYEKLS 196
           + A +GPKLQIS ENE               +P T T   DT++K+QKAK+L+ VYEKLS
Sbjct: 10  AKAQSGPKLQISAENENRLRRLLLNSA----RPTTATAADDTLTKAQKAKKLKAVYEKLS 65

Query: 197 VEGFTSDQIETSLSALNE 250
            EGF + QIE SLSAL E
Sbjct: 66  CEGFGNHQIELSLSALRE 83


>ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226815 [Cucumis sativus]
          Length = 844

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = +2

Query: 14  PSSSNA---SAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDTVSKSQKAKRLRTVY 184
           PS+S+A   S+GPKL IS ENE                 VT   D++SK QK K+L+ VY
Sbjct: 24  PSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTPS-VTPADDSLSKVQKVKKLKAVY 82

Query: 185 EKLSVEGFTSDQIETSLSALNE 250
           EKLS EGFT+DQIE +LSA+ +
Sbjct: 83  EKLSCEGFTNDQIELALSAIGD 104


>ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
          Length = 1642

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = +2

Query: 14  PSSSNA---SAGPKLQISTENEQXXXXXXXXXXXXXXQPVTTTIDTVSKSQKAKRLRTVY 184
           PS+S+A   S+GPKL IS ENE                 VT   D++SK QK K+L+ VY
Sbjct: 24  PSTSDARPSSSGPKLNISAENETRLRRLLLSSGRSTPS-VTPADDSLSKVQKVKKLKAVY 82

Query: 185 EKLSVEGFTSDQIETSLSALNE 250
           EKLS EGFT+DQIE +LSA+ +
Sbjct: 83  EKLSCEGFTNDQIELALSAIGD 104