BLASTX nr result

ID: Coptis25_contig00019382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019382
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605180.1| hypothetical protein MTR_4g025130 [Medicago ...   157   2e-36
ref|XP_003605177.1| hypothetical protein MTR_4g025080, partial [...   157   2e-36
ref|XP_003521959.1| PREDICTED: uncharacterized protein LOC100791...   145   6e-33
ref|NP_973737.1| nitroreductase-like protein [Arabidopsis thalia...   137   2e-30
ref|NP_171704.2| nitroreductase-like protein [Arabidopsis thalia...   137   2e-30

>ref|XP_003605180.1| hypothetical protein MTR_4g025130 [Medicago truncatula]
           gi|355506235|gb|AES87377.1| hypothetical protein
           MTR_4g025130 [Medicago truncatula]
          Length = 633

 Score =  157 bits (397), Expect = 2e-36
 Identities = 88/178 (49%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
 Frame = -3

Query: 529 SLSSLHSPSTTFTLSKNMIPLNKRIFXXXXXXXXXXXXXSKQESNEQELLLAQVLKCHNQ 350
           S+SS  S S   T  K   P N  I               +QE N+Q+  L  VLK HNQ
Sbjct: 41  SMSSSSSKSNNPTQQKQQQPQNPNI---------------EQEQNQQQNKLTHVLKYHNQ 85

Query: 349 TKHSFNNYARGPHGLDWANQPNPFRRYISSPLLPLQH--QKQDXXXXXXXXXXXXXXXXX 176
           TKH+FNNYARGPHGLDWANQPNPFRR+++SPL+PL H   +Q+                 
Sbjct: 86  TKHNFNNYARGPHGLDWANQPNPFRRFLNSPLIPLPHFTPQQEQQSPFYPSLFNSLPSPK 145

Query: 175 XXXXXXXXXXXXXXXXXSAWKSTGLSTWSLRVNPSSGNLHPTETYIISPPINSLSDSP 2
                            SAWKST  STWSLRVNPSSGNLHPTE YII+P I SLSDSP
Sbjct: 146 PISKSTISHFLYHSLALSAWKSTSFSTWSLRVNPSSGNLHPTEAYIIAPSIESLSDSP 203


>ref|XP_003605177.1| hypothetical protein MTR_4g025080, partial [Medicago truncatula]
           gi|355506232|gb|AES87374.1| hypothetical protein
           MTR_4g025080, partial [Medicago truncatula]
          Length = 280

 Score =  157 bits (397), Expect = 2e-36
 Identities = 88/178 (49%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
 Frame = -3

Query: 529 SLSSLHSPSTTFTLSKNMIPLNKRIFXXXXXXXXXXXXXSKQESNEQELLLAQVLKCHNQ 350
           S+SS  S S   T  K   P N  I               +QE N+Q+  L  VLK HNQ
Sbjct: 41  SMSSSSSKSNNPTQQKQQQPQNPNI---------------EQEQNQQQNKLTHVLKYHNQ 85

Query: 349 TKHSFNNYARGPHGLDWANQPNPFRRYISSPLLPLQH--QKQDXXXXXXXXXXXXXXXXX 176
           TKH+FNNYARGPHGLDWANQPNPFRR+++SPL+PL H   +Q+                 
Sbjct: 86  TKHNFNNYARGPHGLDWANQPNPFRRFLNSPLIPLPHFTPQQEQQSPFYPSLFNSLPSPK 145

Query: 175 XXXXXXXXXXXXXXXXXSAWKSTGLSTWSLRVNPSSGNLHPTETYIISPPINSLSDSP 2
                            SAWKST  STWSLRVNPSSGNLHPTE YII+P I SLSDSP
Sbjct: 146 PISKSTISHFLYHSLALSAWKSTSFSTWSLRVNPSSGNLHPTEAYIIAPSIESLSDSP 203


>ref|XP_003521959.1| PREDICTED: uncharacterized protein LOC100791269 [Glycine max]
          Length = 602

 Score =  145 bits (366), Expect = 6e-33
 Identities = 85/181 (46%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
 Frame = -3

Query: 532 FSLSSLHSPSTTFTLSKNMIPLNKRIFXXXXXXXXXXXXXSKQESNEQELLLAQVLKCHN 353
           FS SS  SPST+ + S+N                           +E E  L+ VLK HN
Sbjct: 4   FSSSSSPSPSTSSSSSQN------------------------NNLDEHEHKLSHVLKYHN 39

Query: 352 QTKHSFNNYARGPHGLDWANQPNPFRRYISSPLLPLQH-----QKQDXXXXXXXXXXXXX 188
           QTKHSF NYARGPH LDWANQPNPFRRY+SSPLLPL H     Q                
Sbjct: 40  QTKHSFTNYARGPHNLDWANQPNPFRRYLSSPLLPLLHSEPNPQTLTLTPLYHSLFLSLP 99

Query: 187 XXXXXXXXXXXXXXXXXXXXXSAWKSTGLSTWSLRVNPSSGNLHPTETYIISPPINSLSD 8
                                SAWKSTG STWSLRVNPSSGNLHPTE Y+++PPI  +SD
Sbjct: 100 SPHPPVSKSTLSQLLFDSLSLSAWKSTGFSTWSLRVNPSSGNLHPTEAYVVAPPIPGVSD 159

Query: 7   S 5
           S
Sbjct: 160 S 160


>ref|NP_973737.1| nitroreductase-like protein [Arabidopsis thaliana]
           gi|332189247|gb|AEE27368.1| nitroreductase-like protein
           [Arabidopsis thaliana]
          Length = 543

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/129 (55%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
 Frame = -3

Query: 379 LAQVLKCHNQTKHSFNNYARGPHGLDWANQPNPFRRYISSPLLPLQHQK----QDXXXXX 212
           L  VLK HNQTKHS N YARGP GLDWANQPNPFRRY+S+PLLPLQH       D     
Sbjct: 69  LELVLKYHNQTKHSLNGYARGPRGLDWANQPNPFRRYLSAPLLPLQHPNHDIDDDSDSPL 128

Query: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKSTGLSTWSLRVNPSSGNLHPTETYIIS 32
                                        SAWK+TG STW LRVNPSSGNLHPTE Y+I+
Sbjct: 129 YSTLFDSLPPPKPISLPTISHLFYHSLALSAWKTTGSSTWPLRVNPSSGNLHPTEAYLIA 188

Query: 31  PPINSLSDS 5
           PPI SLS S
Sbjct: 189 PPIPSLSQS 197


>ref|NP_171704.2| nitroreductase-like protein [Arabidopsis thaliana]
           gi|2317902|gb|AAC24366.1| hypothetical protein
           [Arabidopsis thaliana] gi|17979093|gb|AAL49814.1|
           unknown protein [Arabidopsis thaliana]
           gi|21689753|gb|AAM67520.1| unknown protein [Arabidopsis
           thaliana] gi|332189246|gb|AEE27367.1|
           nitroreductase-like protein [Arabidopsis thaliana]
          Length = 642

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/129 (55%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
 Frame = -3

Query: 379 LAQVLKCHNQTKHSFNNYARGPHGLDWANQPNPFRRYISSPLLPLQHQK----QDXXXXX 212
           L  VLK HNQTKHS N YARGP GLDWANQPNPFRRY+S+PLLPLQH       D     
Sbjct: 69  LELVLKYHNQTKHSLNGYARGPRGLDWANQPNPFRRYLSAPLLPLQHPNHDIDDDSDSPL 128

Query: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKSTGLSTWSLRVNPSSGNLHPTETYIIS 32
                                        SAWK+TG STW LRVNPSSGNLHPTE Y+I+
Sbjct: 129 YSTLFDSLPPPKPISLPTISHLFYHSLALSAWKTTGSSTWPLRVNPSSGNLHPTEAYLIA 188

Query: 31  PPINSLSDS 5
           PPI SLS S
Sbjct: 189 PPIPSLSQS 197


Top