BLASTX nr result

ID: Coptis25_contig00019380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019380
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541535.1| PREDICTED: vesicle-fusing ATPase-like [Glyci...    84   9e-15
ref|XP_003529321.1| PREDICTED: vesicle-fusing ATPase-like [Glyci...    84   9e-15
ref|XP_002965653.1| hypothetical protein SELMODRAFT_407213 [Sela...    54   1e-13
ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_003541535.1| PREDICTED: vesicle-fusing ATPase-like [Glycine max]
          Length = 742

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +1

Query: 4   KIMTVGLKVPFEYLGTNFVFTVSQAAVEGQEKSNTLERGMIYADIYIVFEPSKASGIKLI 183
           ++MTVG KV FEY G N+ FTVS AAVEGQEKSN+LERGMI  D YIVFE S+ SGIK++
Sbjct: 138 QVMTVGQKVLFEYHGNNYSFTVSNAAVEGQEKSNSLERGMISDDTYIVFETSRDSGIKIV 197


>ref|XP_003529321.1| PREDICTED: vesicle-fusing ATPase-like [Glycine max]
          Length = 746

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = +1

Query: 4   KIMTVGLKVPFEYLGTNFVFTVSQAAVEGQEKSNTLERGMIYADIYIVFEPSKASGIKLI 183
           ++MTVG KV FEY G N+ FTVS AAVEGQEKSN+LERGMI  D YIVFE S+ SGIK++
Sbjct: 141 QVMTVGQKVLFEYHGNNYSFTVSNAAVEGQEKSNSLERGMISDDTYIVFETSRDSGIKIV 200


>ref|XP_002965653.1| hypothetical protein SELMODRAFT_407213 [Selaginella moellendorffii]
           gi|300166467|gb|EFJ33073.1| hypothetical protein
           SELMODRAFT_407213 [Selaginella moellendorffii]
          Length = 632

 Score = 53.9 bits (128), Expect(2) = 1e-13
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 4   KIMTVGLKVPFEYLGTNFVFTVSQAAVEGQEKSNT-LERGMIYADIYIVFEPSKASGIK 177
           ++ TVG K  FEY G N+VF VS   VEGQ++++T + RGM+  +   +FE +  SGIK
Sbjct: 83  QVFTVGQKATFEYCGINYVFNVSHTLVEGQKENDTNVIRGMLSPETAFLFETNPGSGIK 141



 Score = 47.0 bits (110), Expect(2) = 1e-13
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +3

Query: 195 SIVKGMLLYGPPGTGNTLMVRQIGKML 275
           S VKG+LL+GPPGTG TL+ RQIGKML
Sbjct: 176 SHVKGLLLFGPPGTGKTLIARQIGKML 202


>ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|222870843|gb|EEF07974.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/60 (61%), Positives = 47/60 (78%)
 Frame = +1

Query: 4   KIMTVGLKVPFEYLGTNFVFTVSQAAVEGQEKSNTLERGMIYADIYIVFEPSKASGIKLI 183
           ++MT G KV FEY G N++FTV+QAAVEG+E S   ERGMI +D YIVFE S +SGIK++
Sbjct: 145 QVMTSGQKVTFEYHGNNYIFTVTQAAVEGREDSKDAERGMISSDTYIVFEASNSSGIKIV 204


>ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|222848760|gb|EEE86307.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/60 (58%), Positives = 47/60 (78%)
 Frame = +1

Query: 4   KIMTVGLKVPFEYLGTNFVFTVSQAAVEGQEKSNTLERGMIYADIYIVFEPSKASGIKLI 183
           ++MT G +  FEY G N++FTV+QA VEG+E SN +ERGMI +D YIVFE S +SGIK++
Sbjct: 133 QVMTSGQRATFEYHGNNYIFTVTQATVEGREDSNDVERGMISSDTYIVFEASNSSGIKIV 192


Top