BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019370
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266...   170   8e-40
ref|XP_003612815.1| Lysine-specific demethylase 5B [Medicago tru...   162   2e-37
dbj|BAD08165.1| retinoblastoma binding protein-like [Oryza sativ...   146   9e-33
emb|CBI33835.3| unnamed protein product [Vitis vinifera]              136   1e-29
ref|NP_001183051.1| uncharacterized protein LOC100501391 [Zea ma...   130   9e-28

>ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266131 [Vitis vinifera]
          Length = 884

 Score =  170 bits (430), Expect = 8e-40
 Identities = 132/389 (33%), Positives = 185/389 (47%), Gaps = 69/389 (17%)
 Frame = -1

Query: 1226 NSQGTVLCGFCKRDCYVAHIKCNCYAHPICFLHERELQECPC--QNSCAIYSREDISEME 1053
            NS GTVLC  CKRDCYVA++ CNCY HP+C  H+    + PC   ++  +  REDISEME
Sbjct: 500  NSGGTVLCSLCKRDCYVAYLNCNCYLHPVCLRHDVNSLKLPCGSNHNHTLSLREDISEME 559

Query: 1052 AVAQKFEQENEIIEEVKKLVQCRDDLYMQSKFTYA-KDVYSPYCEIKF------------ 912
            A A++FEQE EI +E++      D   +   F  + +D Y PYCEI F            
Sbjct: 560  AAAKRFEQEEEIFQEIQHAKSDDDLSPLSDMFLISEEDGYYPYCEIDFGLVPGIPVATQD 619

Query: 911  -----EQ------------------------RCEXXXXXXXXXXXXXXNVRSSLPIDGPF 819
                 EQ                         C               ++  ++  D  F
Sbjct: 620  ESPELEQSAPSQPPFNSGREYFRTEMSDASLSCAASTLCSFLKPVESSSIPRNVQGDAKF 679

Query: 818  DL--NVPANGSEEPSVNICGLPKSPPESNNCLNKCQY-------------SDDSDSEIFR 684
            +L  +V    SE+ S NI     S    + CL+  Q              SDDSDSEIFR
Sbjct: 680  NLGDHVSRKFSEDISQNIHESCLSSLSCDECLSTHQNFHGSEVKPIIDQDSDDSDSEIFR 739

Query: 683  VKRRSSMRVDKRILSNGTT---SEQQGLKRLKKIQAEGRDGWFSSANGCMMNKLDQIKNH 513
            VKRRSS++V+KR  ++ ++    + QGLKRLKK+Q +GR G  + +   M N+ ++  + 
Sbjct: 740  VKRRSSVKVEKRNANDASSVKHFDHQGLKRLKKLQPQGRCGQLTLSECSMTNEQNRSFSS 799

Query: 512  IPSVHSKEVAISAKMDRSCGRNSTSLAIKCKG-------TNSNVHIKKDATRDQSRKQNS 354
              S HSK    +   DR     +  ++IK K        +    H +KD   D  +   +
Sbjct: 800  -SSHHSKRSTDNVPRDRFSAGTTMPISIKFKKMANEEAMSRQREHHRKDRFHDLGK---T 855

Query: 353  VRKVSSVESGPKRLKVRGPTFPTGLRSRL 267
            +R+  S+E GPKRLKVRGP+F  G  SRL
Sbjct: 856  MREPPSIEIGPKRLKVRGPSF-LGWESRL 883


>ref|XP_003612815.1| Lysine-specific demethylase 5B [Medicago truncatula]
            gi|355514150|gb|AES95773.1| Lysine-specific demethylase
            5B [Medicago truncatula]
          Length = 845

 Score =  162 bits (409), Expect = 2e-37
 Identities = 128/379 (33%), Positives = 190/379 (50%), Gaps = 56/379 (14%)
 Frame = -1

Query: 1235 VSANSQGTVLCGFCKRDCYVAHIKCNCYAHPICFLHERELQECPCQNSCAIYSREDISEM 1056
            VS++S GT+LC  CKRDCYVA++ C+C+ HP+C  H+ +  +  C +   +Y REDI++M
Sbjct: 476  VSSHSHGTILCSLCKRDCYVAYVDCSCHMHPVCLRHDVKSLDFICGSKHTLYLREDIADM 535

Query: 1055 EAVAQKFEQENEIIEEVKKLVQCRDDLY---MQSKFTYAK-DVYSPYCEIKFEQRCEXXX 888
            EA A+ FEQE+ I++E+ K  +   ++Y   +   F  A+ + Y PYCE+K +   E   
Sbjct: 536  EAAAKMFEQEDGILDEISKQSKSDQNMYSHPLSDMFQRAEANGYEPYCELKLDSMIEFYT 595

Query: 887  XXXXXXXXXXXNVR--------SSLP-----------------IDGPFDL-NVPANG--- 795
                         +        S +P                 +  P D  + P N    
Sbjct: 596  TPGLSTNNPECGTQNQFVLGHCSEIPKPEVSDVSFSAASTLCSLSEPHDCSSAPKNAEGH 655

Query: 794  ----SEEPSVNICGLPKSPP---ESNNCLNKCQYSD----------DSDSEIFRVKRRSS 666
                 E  S + C    SP    ES+  L+  Q  D          DSDS IFRVKR SS
Sbjct: 656  CEELGETISNSACESSLSPALYHESSVKLHDLQKPDIKPIADNDSDDSDSGIFRVKRPSS 715

Query: 665  MRVDKRILS--NGTTSEQQGLKRLKKIQAEGRDGWFSSANGCMMN-KLDQIKNHIPSVHS 495
            ++ +KR L       SEQQGLKRLKK+  EG+      +N   MN +  +  +    V+ 
Sbjct: 716  LKAEKRNLKIMASKHSEQQGLKRLKKVLPEGK------SNRQQMNFRTSESSDKYNPVND 769

Query: 494  KEVAISAKMDRSCGRNSTSLAIKCKGTNS---NVHIKKDATRDQSRKQNSVRKVSSVESG 324
            K V IS K +R    N T ++ + K + +   ++H+++D  R + R Q + R+  S+E G
Sbjct: 770  K-VDISLK-NRFARGNGTPISARYKKSGNEEISMHMQQDHHR-RERLQQTYREAPSIEIG 826

Query: 323  PKRLKVRGPTFPTGLRSRL 267
            PKRLKVRGP+F  G+ SRL
Sbjct: 827  PKRLKVRGPSF-LGIESRL 844


>dbj|BAD08165.1| retinoblastoma binding protein-like [Oryza sativa Japonica Group]
            gi|41053206|dbj|BAD08168.1| retinoblastoma binding
            protein-like [Oryza sativa Japonica Group]
          Length = 387

 Score =  146 bits (369), Expect = 9e-33
 Identities = 116/361 (32%), Positives = 159/361 (44%), Gaps = 46/361 (12%)
 Frame = -1

Query: 1229 ANSQGTVLCGFCKRDCYVAHIKCNCYAHPICFLHERELQECPCQNSCAIYSREDISEMEA 1050
            A+   TVLCG C+RDCYVAHI CNC    IC  HE E++ CPC     ++ R+DI E+E 
Sbjct: 30   ADIDATVLCGICRRDCYVAHIMCNCRIDAICLCHEEEIRRCPCSCDRVVFVRKDIFELET 89

Query: 1049 VAQKFEQENEIIEEVKKLVQCRDDLYMQSKFTYAKD---VYSPYCEIKFEQRCEXXXXXX 879
            +++KFE+E+ I++ VKK +  RD     S F    D    Y PYC I  +   E      
Sbjct: 90   LSKKFEEESGILDAVKKQMARRDGASQHSNFFDCTDHEAEYYPYCNIHIDPSPEIYSISE 149

Query: 878  XXXXXXXXNVRSSLPIDGPFDLNVPANGSEEPSVNI-----------CGLPKSPPESNNC 732
                               +DLN P   +   + +            C        S++C
Sbjct: 150  TNFVG--------------YDLNNPHPAASTVTFSFVPHEYSTQSDECTSSNRRALSSSC 195

Query: 731  L-----------NKCQYS----------------DDSDSEIFRVKRRSSMRVDKRILSNG 633
            L           N CQ S                DDSD EIFRVKRRS +  +KR + +G
Sbjct: 196  LENTITPENAISNACQLSTPDQTCLSDKLAAHDTDDSDCEIFRVKRRSGLTPEKRHMEDG 255

Query: 632  TT--SEQQGLKRLKKIQAEGRDGWFSSANGCMMNKLDQIKNHIPS--VHSKEVAISAKMD 465
            TT  +  Q LKRLKKI A  R            +KL ++     S  VH+ +        
Sbjct: 256  TTNFTGNQVLKRLKKINAHDR----------QEHKLPELSCGARSEPVHTDDCIHCVDFI 305

Query: 464  RSCGRNSTSLAIKCKGTNSNVHIKKDATRDQSRKQNSVRKVS-SVESGPKRLKVRGPTFP 288
               G +  +          + +I +D     S+K NS    S S+E GPKRLK+RGP+FP
Sbjct: 306  SENGDDFIAPTKLKMIHQLDANIVEDEVA-SSQKYNSCNYQSPSIELGPKRLKIRGPSFP 364

Query: 287  T 285
            +
Sbjct: 365  S 365


>emb|CBI33835.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  136 bits (342), Expect = 1e-29
 Identities = 98/279 (35%), Positives = 133/279 (47%), Gaps = 62/279 (22%)
 Frame = -1

Query: 1226 NSQGTVLCGFCKRDCYVAHIKCNCYAHPICFLHERELQECPC--QNSCAIYSREDISEME 1053
            NS GTVLC  CKRDCYVA++ CNCY HP+C  H+    + PC   ++  +  REDISEME
Sbjct: 451  NSGGTVLCSLCKRDCYVAYLNCNCYLHPVCLRHDVNSLKLPCGSNHNHTLSLREDISEME 510

Query: 1052 AVAQKFEQENEIIEEVKKLVQCRDDLYMQSKFTYA-KDVYSPYCEIKF------------ 912
            A A++FEQE EI +E++      D   +   F  + +D Y PYCEI F            
Sbjct: 511  AAAKRFEQEEEIFQEIQHAKSDDDLSPLSDMFLISEEDGYYPYCEIDFGLVPGIPVATQD 570

Query: 911  -----EQ------------------------RCEXXXXXXXXXXXXXXNVRSSLPIDGPF 819
                 EQ                         C               ++  ++  D  F
Sbjct: 571  ESPELEQSAPSQPPFNSGREYFRTEMSDASLSCAASTLCSFLKPVESSSIPRNVQGDAKF 630

Query: 818  DL--NVPANGSEEPSVNICGLPKSPPESNNCLNKCQY-------------SDDSDSEIFR 684
            +L  +V    SE+ S NI     S    + CL+  Q              SDDSDSEIFR
Sbjct: 631  NLGDHVSRKFSEDISQNIHESCLSSLSCDECLSTHQNFHGSEVKPIIDQDSDDSDSEIFR 690

Query: 683  VKRRSSMRVDKRILSNGTT---SEQQGLKRLKKIQAEGR 576
            VKRRSS++V+KR  ++ ++    + QGLKRLKK+Q +GR
Sbjct: 691  VKRRSSVKVEKRNANDASSVKHFDHQGLKRLKKLQPQGR 729


>ref|NP_001183051.1| uncharacterized protein LOC100501391 [Zea mays]
            gi|238009034|gb|ACR35552.1| unknown [Zea mays]
          Length = 366

 Score =  130 bits (326), Expect = 9e-28
 Identities = 110/354 (31%), Positives = 156/354 (44%), Gaps = 39/354 (11%)
 Frame = -1

Query: 1229 ANSQGTVLCGFCKRDCYVAHIKCNCYAHPICFLHERELQECPCQNSCAIYSREDISEMEA 1050
            A+   TVLCG CKRDCYVAHI CNC A  IC  HE E+ +C C     ++ R+DI E+E 
Sbjct: 30   ADIDATVLCGICKRDCYVAHIMCNCRADAICLCHEEEISKCSCNCDRVVFVRKDIFELEE 89

Query: 1049 VAQKFEQENEIIEEVKKLVQCRDDLYMQSKFTYAKD---VYSPYCEIKFEQRCEXXXXXX 879
            +++KFE E  I++EV K +   D   M    +   D    Y PYC+I  +   E      
Sbjct: 90   ISKKFE-EIGILDEVGKQMSQNDGYNMHPYLSNGIDHNAKYFPYCKILIDTSPELRTF-- 146

Query: 878  XXXXXXXXNVRSSLPIDGPFDLNVP---------ANGSEEPSV--NICGLPKSPPESNNC 732
                       S + + G +DLN P         A+G  E S   + C   K    S++C
Sbjct: 147  -----------SEVDVLG-YDLNKPYPTLSTITSAHGPHEYSTQSDECTSSKQRTYSSSC 194

Query: 731  LNK---------------------CQYSDDSDSEIFRVKRRSSMRVDKRILSN--GTTSE 621
                                     Q +DDSD E+FRVKRRSS+ ++KR   +   T +E
Sbjct: 195  PENGTLSVYPLCTSDQAFSTDKLAAQDTDDSDCEVFRVKRRSSIVMEKRCSEDLTITLTE 254

Query: 620  QQGLKRLKKIQAEGRDGWFSSANGCMMNKLDQIKNHIPSV--HSKEVAISAKMDRSCGRN 447
             Q L+RLKK  ++ R       N    + LD I  +  +    SK+     ++D     +
Sbjct: 255  NQALRRLKKACSDDR-----QENATESHCLDFISGNTDNFINRSKQKMNVDQLDAKNVED 309

Query: 446  STSLAIKCKGTNSNVHIKKDATRDQSRKQNSVRKVSSVESGPKRLKVRGPTFPT 285
              +   K  G +                        SV+ GPKRLK+RGP+FP+
Sbjct: 310  EVAFGQKSIGCS--------------------YLSPSVDLGPKRLKIRGPSFPS 343