BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019358
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|ACE80799.1| pentatricopeptide repeat protein [Isoetes engelma...   103   1e-20

>ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/96 (69%), Positives = 77/96 (80%)
 Frame = -2

Query: 288 NMYAEGRRWSEVDYVRGLMRKRGLRKTPGYSLTEVANVVHAFFAGDDSHPFREEIYKMLE 109
           N+YAE RRW +VDY+RGLMR RGL+KTPGYSL E  N VH FFAGD+SHP  EEIY  LE
Sbjct: 644 NIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLE 703

Query: 108 SINMQIEASGYIPDTSCVLRDVDE*MKAKLLCGHSE 1
           S+   +E SGY+PDTSCVLRDVDE MK ++L GHSE
Sbjct: 704 SLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSE 739


>ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/96 (63%), Positives = 78/96 (81%)
 Frame = -2

Query: 288 NMYAEGRRWSEVDYVRGLMRKRGLRKTPGYSLTEVANVVHAFFAGDDSHPFREEIYKMLE 109
           N+YAE R+W  V+Y+RGLMR +G++K PGYSL EV N V+ FFA DDSHP   +IY++LE
Sbjct: 660 NIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLE 719

Query: 108 SINMQIEASGYIPDTSCVLRDVDE*MKAKLLCGHSE 1
           ++ +++EA GYIPDTSCVLRDV+E MK KLL GHSE
Sbjct: 720 NLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSE 755


>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/96 (50%), Positives = 69/96 (71%)
 Frame = -2

Query: 288 NMYAEGRRWSEVDYVRGLMRKRGLRKTPGYSLTEVANVVHAFFAGDDSHPFREEIYKMLE 109
           N+YA   RW +V  +R LM KR L+K PGY+  EV N+++ F AGD+SH    EIY+ML+
Sbjct: 413 NIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLK 472

Query: 108 SINMQIEASGYIPDTSCVLRDVDE*MKAKLLCGHSE 1
           S++ ++E++GY+PDT+ VL DVDE +K  +L  HSE
Sbjct: 473 SLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSE 508


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/96 (50%), Positives = 64/96 (66%)
 Frame = -2

Query: 288 NMYAEGRRWSEVDYVRGLMRKRGLRKTPGYSLTEVANVVHAFFAGDDSHPFREEIYKMLE 109
           N+YA    W EVD VR +MR RGL+K PGYS  E+ N VH   AGD SHP   +I + L 
Sbjct: 555 NIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLA 614

Query: 108 SINMQIEASGYIPDTSCVLRDVDE*MKAKLLCGHSE 1
            + ++++ SGY+P T  VL+DV+E  K ++LCGHSE
Sbjct: 615 KLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSE 650


>gb|ACE80799.1| pentatricopeptide repeat protein [Isoetes engelmannii]
          Length = 143

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/96 (52%), Positives = 64/96 (66%)
 Frame = -2

Query: 288 NMYAEGRRWSEVDYVRGLMRKRGLRKTPGYSLTEVANVVHAFFAGDDSHPFREEIYKMLE 109
           N+YA   RW +V  +R LM +RG++K PG S  E+ N VH F  GD+SHP +E IY  L+
Sbjct: 28  NIYARAGRWVDVARIRKLMVERGIKKEPGCSSIEIGNQVHTFLIGDNSHPMKEAIYARLK 87

Query: 108 SINMQIEASGYIPDTSCVLRDVDE*MKAKLLCGHSE 1
            +N Q+EA GY+PDTS VL D+DE  K  LL  HSE
Sbjct: 88  LLNTQLEACGYVPDTSSVLHDLDEETKETLLGYHSE 123