BLASTX nr result

ID: Coptis25_contig00019348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019348
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis] gi|...   135   2e-52
ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...   136   7e-52
ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-51
ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-li...   136   7e-51
emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]   135   7e-51

>ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis]
           gi|223540951|gb|EEF42509.1| Flotillin-1, putative
           [Ricinus communis]
          Length = 481

 Score =  135 bits (341), Expect(2) = 2e-52
 Identities = 66/89 (74%), Positives = 82/89 (92%)
 Frame = +3

Query: 6   REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 185
           REGQTLQNAAKIDAETK+I+TQRQGEG KEEIKVKT VKI+EN+REA++AE NAEL+ KK
Sbjct: 194 REGQTLQNAAKIDAETKIIATQRQGEGKKEEIKVKTEVKIYENQREAEVAEVNAELAKKK 253

Query: 186 AEWSRQSRLAEVEAVKAVAIREAELQRDV 272
           A W++++++AEVEA KAV +R+AELQR+V
Sbjct: 254 AGWAKEAQVAEVEASKAVTLRDAELQREV 282



 Score = 96.3 bits (238), Expect(2) = 2e-52
 Identities = 51/86 (59%), Positives = 57/86 (66%)
 Frame = +2

Query: 374 EKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQQ 553
           EKLKAE LSKA+VEYET+VQEAN                       Q+A+A AT+Y RQQ
Sbjct: 292 EKLKAEFLSKASVEYETKVQEANWELYKKQKEAEAILYEKEKEAEAQKAIADATYYARQQ 351

Query: 554 YADGEFYAKQKEAEGLITLAQAQGTY 631
            ADGE YAKQKEAEGL+ LAQAQGTY
Sbjct: 352 VADGELYAKQKEAEGLVALAQAQGTY 377


>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  136 bits (343), Expect(2) = 7e-52
 Identities = 66/89 (74%), Positives = 83/89 (93%)
 Frame = +3

Query: 6   REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 185
           REGQTLQNAA+IDAETK+I+TQRQG+G KEEIKVKT VKI+EN REA++AEANA+L+ KK
Sbjct: 194 REGQTLQNAARIDAETKIIATQRQGDGKKEEIKVKTEVKIYENHREAEVAEANADLAKKK 253

Query: 186 AEWSRQSRLAEVEAVKAVAIREAELQRDV 272
           A WS+++++AEVEA KAV++REAELQR+V
Sbjct: 254 AGWSKEAQVAEVEATKAVSLREAELQREV 282



 Score = 93.6 bits (231), Expect(2) = 7e-52
 Identities = 50/87 (57%), Positives = 56/87 (64%)
 Frame = +2

Query: 371 TEKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQ 550
           TEKLKAE LS+A+VEYET+VQEAN                       Q+A A ATFY RQ
Sbjct: 291 TEKLKAEFLSQASVEYETKVQEANWELYTKQKAAEAILYEKQKEADAQKATADATFYARQ 350

Query: 551 QYADGEFYAKQKEAEGLITLAQAQGTY 631
           Q ADGE Y+KQKEAEGL+ LAQAQG Y
Sbjct: 351 QVADGELYSKQKEAEGLVALAQAQGVY 377


>ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|222855626|gb|EEE93173.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  129 bits (324), Expect(2) = 6e-51
 Identities = 63/89 (70%), Positives = 80/89 (89%)
 Frame = +3

Query: 6   REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 185
           REG+T QNAAKIDAETK+I+TQRQG+G KEEIKVKT VKI+EN REA++AEANA+L+ KK
Sbjct: 195 REGRTQQNAAKIDAETKIIATQRQGDGKKEEIKVKTEVKIYENHREAEVAEANADLAKKK 254

Query: 186 AEWSRQSRLAEVEAVKAVAIREAELQRDV 272
           A WS ++++AEVEA KAV++R+AELQ +V
Sbjct: 255 AGWSMEAQVAEVEATKAVSLRDAELQMEV 283



 Score = 97.8 bits (242), Expect(2) = 6e-51
 Identities = 52/87 (59%), Positives = 58/87 (66%)
 Frame = +2

Query: 371 TEKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQ 550
           TEKLKAE LSKA+VEYET+VQEAN                       Q+A+A ATFY+RQ
Sbjct: 292 TEKLKAEFLSKASVEYETKVQEANWELYRKQKAAEAILYEKEKEADAQKAIADATFYSRQ 351

Query: 551 QYADGEFYAKQKEAEGLITLAQAQGTY 631
           Q ADGE YAKQKEAEGL+ LAQAQG Y
Sbjct: 352 QVADGELYAKQKEAEGLVALAQAQGVY 378


>ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein 4-like
           [Cucumis sativus] gi|449493412|ref|XP_004159281.1|
           PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein
           4-like [Cucumis sativus]
          Length = 841

 Score =  136 bits (343), Expect(2) = 7e-51
 Identities = 66/89 (74%), Positives = 82/89 (92%)
 Frame = +3

Query: 6   REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 185
           REGQTLQNAAKIDAETK+I+TQRQG+G KEEIKVK  VK+FEN+REA++AEANAEL+ KK
Sbjct: 194 REGQTLQNAAKIDAETKIIATQRQGQGKKEEIKVKAEVKVFENEREAEVAEANAELAKKK 253

Query: 186 AEWSRQSRLAEVEAVKAVAIREAELQRDV 272
           A W+R +++AEVEA KAVA+REA+LQ++V
Sbjct: 254 AAWTRAAQVAEVEAAKAVALREAQLQKEV 282



 Score = 90.1 bits (222), Expect(2) = 7e-51
 Identities = 49/87 (56%), Positives = 55/87 (63%)
 Frame = +2

Query: 371 TEKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQ 550
           TEKLKAE LSKA+VEYET+VQEAN                       Q+ALA A FY RQ
Sbjct: 291 TEKLKAEFLSKASVEYETKVQEANWELYDKQKKAEAVLFEKEREAEAQKALADAGFYARQ 350

Query: 551 QYADGEFYAKQKEAEGLITLAQAQGTY 631
           Q ADGE YAK+KEAEGL+ LA+AQ  Y
Sbjct: 351 QVADGELYAKKKEAEGLVALAEAQALY 377



 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 42/85 (49%), Positives = 49/85 (57%)
 Frame = +2

Query: 371 TEKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQ 550
           TEKLKAE LSKA++EYET+ QEAN                       Q+ALA A FY  Q
Sbjct: 651 TEKLKAELLSKASIEYETKAQEANCEFYXKQIKAEAELFQKQXNAEAQKALADAKFYACQ 710

Query: 551 QYADGEFYAKQKEAEGLITLAQAQG 625
           Q AD + YAK+KEAEGL+      G
Sbjct: 711 QTADRDLYAKKKEAEGLVAXGTGTG 735



 Score = 53.1 bits (126), Expect(2) = 2e-20
 Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = +3

Query: 78  GEGTKEEIKVKTAVKIFE-NKREADIAEANAELSMKKAEWSRQSRLAEVEAVKAVAIREA 254
           G+ T++E   +  V + E N   A++ EANAEL+ KKA  ++ S +AEVEA KAV++REA
Sbjct: 577 GQKTQQEASNQAKVDVAEANAEVAEVVEANAELAKKKAILAKGSEMAEVEAAKAVSLREA 636

Query: 255 ELQRDV 272
           + ++ V
Sbjct: 637 DQKKKV 642


>emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]
          Length = 488

 Score =  135 bits (339), Expect(2) = 7e-51
 Identities = 64/90 (71%), Positives = 83/90 (92%)
 Frame = +3

Query: 3   LREGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMK 182
           LREGQTLQNAAKIDAETK+ISTQRQG+G KEEI+VKT +K++EN+REA++AE N+ L+ K
Sbjct: 193 LREGQTLQNAAKIDAETKIISTQRQGDGKKEEIRVKTEIKVYENQREAEVAEVNSVLAKK 252

Query: 183 KAEWSRQSRLAEVEAVKAVAIREAELQRDV 272
           KA W++++++AEVEA KAVA+REAELQR+V
Sbjct: 253 KAVWTKEAQVAEVEAAKAVALREAELQREV 282



 Score = 91.7 bits (226), Expect(2) = 7e-51
 Identities = 50/87 (57%), Positives = 56/87 (64%)
 Frame = +2

Query: 371 TEKLKAEHLSKATVEYETRVQEANXXXXXXXXXXXXXXXXXXXXXXXQRALASATFYTRQ 550
           TEKLKAE LSKA+VEYET+VQEAN                       Q+A A A FY RQ
Sbjct: 291 TEKLKAEFLSKASVEYETKVQEANWELYKKQKXAEAVLYEKEKEAAAQKASAEAAFYARQ 350

Query: 551 QYADGEFYAKQKEAEGLITLAQAQGTY 631
           Q ADGE YAK+KEAEG++ LAQAQG Y
Sbjct: 351 QLADGELYAKKKEAEGIVALAQAQGVY 377


Top