BLASTX nr result
ID: Coptis25_contig00019342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019342 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ... 89 1e-29 emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera] 88 4e-29 ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ... 88 4e-29 gb|AEZ02303.1| RAV1 [Castanea sativa] 89 5e-29 gb|ACF74549.1| RAV [Nicotiana tabacum] 86 2e-28 >ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis] gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis] Length = 371 Score = 88.6 bits (218), Expect(2) = 1e-29 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = +3 Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416 +YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDI Sbjct: 67 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDI 107 Score = 66.2 bits (160), Expect(2) = 1e-29 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 10/70 (14%) Frame = +1 Query: 37 MDTGCTDE--TSDTISMSPTTI-------MVSIQPEK-LCRVRSGSSVVVDTENDIEAES 186 MD C DE TSD+IS++PT+ + S PE LCRV SG+SVV+D+E+ IEAES Sbjct: 1 MDGSCIDESTTSDSISITPTSNISPSSNPLPSKSPESPLCRVGSGTSVVLDSESGIEAES 60 Query: 187 RKLPSSQYKG 216 RKLPSS+YKG Sbjct: 61 RKLPSSKYKG 70 >emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera] Length = 364 Score = 87.8 bits (216), Expect(2) = 4e-29 Identities = 38/41 (92%), Positives = 41/41 (100%) Frame = +3 Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416 ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAAKAYDI Sbjct: 62 RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDI 102 Score = 65.5 bits (158), Expect(2) = 4e-29 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%) Frame = +1 Query: 37 MDTGCTDE--TSDTISMSP---TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPS 201 MD C DE TSD+IS S + + + PE LCRV SG+SV++D+E+ IEAESRKLPS Sbjct: 1 MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 60 Query: 202 SQYKG 216 S++KG Sbjct: 61 SRFKG 65 >ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor TEM1-like [Vitis vinifera] Length = 358 Score = 87.8 bits (216), Expect(2) = 4e-29 Identities = 38/41 (92%), Positives = 41/41 (100%) Frame = +3 Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416 ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAAKAYDI Sbjct: 62 RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDI 102 Score = 65.5 bits (158), Expect(2) = 4e-29 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%) Frame = +1 Query: 37 MDTGCTDE--TSDTISMSP---TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPS 201 MD C DE TSD+IS S + + + PE LCRV SG+SV++D+E+ IEAESRKLPS Sbjct: 1 MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 60 Query: 202 SQYKG 216 S++KG Sbjct: 61 SRFKG 65 >gb|AEZ02303.1| RAV1 [Castanea sativa] Length = 383 Score = 88.6 bits (218), Expect(2) = 5e-29 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = +3 Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416 +YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDI Sbjct: 69 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDI 109 Score = 64.3 bits (155), Expect(2) = 5e-29 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 12/72 (16%) Frame = +1 Query: 37 MDTGCTDE--TSDTISMSPTTIM--------VSIQPEKLCRVRSG--SSVVVDTENDIEA 180 MD C DE TSD++S+SP T ++ PE LCRV SG S++++D+E+ IEA Sbjct: 1 MDGSCIDESTTSDSMSVSPATTQSPFPSPTNITKSPESLCRVGSGTTSTLILDSESGIEA 60 Query: 181 ESRKLPSSQYKG 216 ESRKLPSS+YKG Sbjct: 61 ESRKLPSSKYKG 72 >gb|ACF74549.1| RAV [Nicotiana tabacum] Length = 385 Score = 85.9 bits (211), Expect(2) = 2e-28 Identities = 36/41 (87%), Positives = 40/41 (97%) Frame = +3 Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416 +Y+GVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAA+AYD+ Sbjct: 64 RYEGVVPQPNGRWGAQIYEKHQRVWLGTFNEENEAARAYDV 104 Score = 65.1 bits (157), Expect(2) = 2e-28 Identities = 31/56 (55%), Positives = 44/56 (78%), Gaps = 4/56 (7%) Frame = +1 Query: 61 TSDTISMSP----TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPSSQYKG 216 TSD++S++P +T+ V PE LCR+ SG+SV++D EN +EAESRKLPSS+Y+G Sbjct: 12 TSDSLSIAPAISTSTLPVMKSPESLCRMGSGTSVIIDAENGVEAESRKLPSSRYEG 67