BLASTX nr result

ID: Coptis25_contig00019342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019342
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...    89   1e-29
emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]    88   4e-29
ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...    88   4e-29
gb|AEZ02303.1| RAV1 [Castanea sativa]                                  89   5e-29
gb|ACF74549.1| RAV [Nicotiana tabacum]                                 86   2e-28

>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 371

 Score = 88.6 bits (218), Expect(2) = 1e-29
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416
           +YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDI
Sbjct: 67  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDI 107



 Score = 66.2 bits (160), Expect(2) = 1e-29
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 10/70 (14%)
 Frame = +1

Query: 37  MDTGCTDE--TSDTISMSPTTI-------MVSIQPEK-LCRVRSGSSVVVDTENDIEAES 186
           MD  C DE  TSD+IS++PT+        + S  PE  LCRV SG+SVV+D+E+ IEAES
Sbjct: 1   MDGSCIDESTTSDSISITPTSNISPSSNPLPSKSPESPLCRVGSGTSVVLDSESGIEAES 60

Query: 187 RKLPSSQYKG 216
           RKLPSS+YKG
Sbjct: 61  RKLPSSKYKG 70


>emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score = 87.8 bits (216), Expect(2) = 4e-29
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = +3

Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAAKAYDI
Sbjct: 62  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDI 102



 Score = 65.5 bits (158), Expect(2) = 4e-29
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
 Frame = +1

Query: 37  MDTGCTDE--TSDTISMSP---TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPS 201
           MD  C DE  TSD+IS S    + +  +  PE LCRV SG+SV++D+E+ IEAESRKLPS
Sbjct: 1   MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 60

Query: 202 SQYKG 216
           S++KG
Sbjct: 61  SRFKG 65


>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score = 87.8 bits (216), Expect(2) = 4e-29
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = +3

Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAAKAYDI
Sbjct: 62  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDI 102



 Score = 65.5 bits (158), Expect(2) = 4e-29
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
 Frame = +1

Query: 37  MDTGCTDE--TSDTISMSP---TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPS 201
           MD  C DE  TSD+IS S    + +  +  PE LCRV SG+SV++D+E+ IEAESRKLPS
Sbjct: 1   MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 60

Query: 202 SQYKG 216
           S++KG
Sbjct: 61  SRFKG 65


>gb|AEZ02303.1| RAV1 [Castanea sativa]
          Length = 383

 Score = 88.6 bits (218), Expect(2) = 5e-29
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416
           +YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDI
Sbjct: 69  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDI 109



 Score = 64.3 bits (155), Expect(2) = 5e-29
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 12/72 (16%)
 Frame = +1

Query: 37  MDTGCTDE--TSDTISMSPTTIM--------VSIQPEKLCRVRSG--SSVVVDTENDIEA 180
           MD  C DE  TSD++S+SP T          ++  PE LCRV SG  S++++D+E+ IEA
Sbjct: 1   MDGSCIDESTTSDSMSVSPATTQSPFPSPTNITKSPESLCRVGSGTTSTLILDSESGIEA 60

Query: 181 ESRKLPSSQYKG 216
           ESRKLPSS+YKG
Sbjct: 61  ESRKLPSSKYKG 72


>gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score = 85.9 bits (211), Expect(2) = 2e-28
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +3

Query: 294 QYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEKEAAKAYDI 416
           +Y+GVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAA+AYD+
Sbjct: 64  RYEGVVPQPNGRWGAQIYEKHQRVWLGTFNEENEAARAYDV 104



 Score = 65.1 bits (157), Expect(2) = 2e-28
 Identities = 31/56 (55%), Positives = 44/56 (78%), Gaps = 4/56 (7%)
 Frame = +1

Query: 61  TSDTISMSP----TTIMVSIQPEKLCRVRSGSSVVVDTENDIEAESRKLPSSQYKG 216
           TSD++S++P    +T+ V   PE LCR+ SG+SV++D EN +EAESRKLPSS+Y+G
Sbjct: 12  TSDSLSIAPAISTSTLPVMKSPESLCRMGSGTSVIIDAENGVEAESRKLPSSRYEG 67


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