BLASTX nr result

ID: Coptis25_contig00019323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019323
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              423   e-116
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   423   e-116
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   402   e-110
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   395   e-108
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...   387   e-105

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/325 (64%), Positives = 256/325 (78%)
 Frame = +1

Query: 1    AHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVAD 180
            A YWQ+AFLWDAALNS YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVAD
Sbjct: 221  ASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVAD 280

Query: 181  TVYALINSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAH 360
            TV+AL+N+I+PS LQ  AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS  AH
Sbjct: 281  TVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAH 340

Query: 361  LTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLRKKRMKALIPQIVQA 540
            L++A LS YLNE+LPS+LFVKASNAEL E +RF+RLAH DLS+ L+K++MKALIPQI+Q 
Sbjct: 341  LSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKALIPQIMQI 400

Query: 541  IYXXXXXXXXXXXXXXXRSFFDGSRMVSFLTSLFLLVEPIQGIGKAYNELKQGEPAIERL 720
            IY                   DGS +VSF+TSL LL++PIQG+GKAYNELKQGEPAIERL
Sbjct: 401  IYFGALSIFFVGSLVVPSGALDGSLLVSFVTSLVLLIDPIQGVGKAYNELKQGEPAIERL 460

Query: 721  FDLTMFSPQVIEKSDAVELDAVKGDVKFCDISFKYSDTSPLVLNKLNLHVKPGETIAFIG 900
            FDLT F  QV+EK DAV+LD+V G+VKFC+ISF+Y D  PL+LN L+LH+K GET+A +G
Sbjct: 461  FDLTRFESQVLEKPDAVDLDSVIGEVKFCNISFRYGDRMPLILNGLDLHIKAGETVALVG 520

Query: 901  PSXXXXXXXXXXXXRLYDPLCGSIL 975
            PS            RLYDPLCG ++
Sbjct: 521  PSGGGKTTLVKLLLRLYDPLCGCVI 545


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
            vinifera]
          Length = 630

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/325 (64%), Positives = 256/325 (78%)
 Frame = +1

Query: 1    AHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVAD 180
            A YWQ+AFLWDAALNS YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVAD
Sbjct: 127  ASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVAD 186

Query: 181  TVYALINSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAH 360
            TV+AL+N+I+PS LQ  AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS  AH
Sbjct: 187  TVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAH 246

Query: 361  LTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLRKKRMKALIPQIVQA 540
            L++A LS YLNE+LPS+LFVKASNAEL E +RF+RLAH DLS+ L+K++MKALIPQI+Q 
Sbjct: 247  LSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKALIPQIMQI 306

Query: 541  IYXXXXXXXXXXXXXXXRSFFDGSRMVSFLTSLFLLVEPIQGIGKAYNELKQGEPAIERL 720
            IY                   DGS +VSF+TSL LL++PIQG+GKAYNELKQGEPAIERL
Sbjct: 307  IYFGALSIFFVGSLVVPSGALDGSLLVSFVTSLVLLIDPIQGVGKAYNELKQGEPAIERL 366

Query: 721  FDLTMFSPQVIEKSDAVELDAVKGDVKFCDISFKYSDTSPLVLNKLNLHVKPGETIAFIG 900
            FDLT F  QV+EK DAV+LD+V G+VKFC+ISF+Y D  PL+LN L+LH+K GET+A +G
Sbjct: 367  FDLTRFESQVLEKPDAVDLDSVIGEVKFCNISFRYGDRMPLILNGLDLHIKAGETVALVG 426

Query: 901  PSXXXXXXXXXXXXRLYDPLCGSIL 975
            PS            RLYDPLCG ++
Sbjct: 427  PSGGGKTTLVKLLLRLYDPLCGCVI 451


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
            trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
            family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  402 bits (1033), Expect = e-110
 Identities = 204/325 (62%), Positives = 249/325 (76%)
 Frame = +1

Query: 1    AHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVAD 180
            A Y Q A LW+AALN++YKIRV+VF++VLER+LGFFE G  VS+GD+AYRITAEA+DVAD
Sbjct: 68   ATYGQHALLWEAALNASYKIRVFVFERVLERELGFFEGGGAVSSGDVAYRITAEAADVAD 127

Query: 181  TVYALINSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAH 360
            T+YAL+N+I+PS LQ  AMA++M++++P L+LISA+VIPC +L IA+LG  LR+IS +A 
Sbjct: 128  TLYALLNTIVPSALQLSAMASRMLVISPALSLISAMVIPCTALAIAYLGTRLRKISKKAQ 187

Query: 361  LTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLRKKRMKALIPQIVQA 540
            LT++ LS YLNEVLP++LFVKASNAE CE +RF+RLA+ADLS  L K++MKA IPQIVQ 
Sbjct: 188  LTISALSAYLNEVLPAILFVKASNAEFCEIARFERLAYADLSALLTKRKMKAFIPQIVQI 247

Query: 541  IYXXXXXXXXXXXXXXXRSFFDGSRMVSFLTSLFLLVEPIQGIGKAYNELKQGEPAIERL 720
            IY                  FDG  MVSF+TSL  +VEPIQ +GKAYNE KQGEPAIERL
Sbjct: 248  IYFGALSILCVGSMVVSSGCFDGCSMVSFITSLIFVVEPIQDVGKAYNEWKQGEPAIERL 307

Query: 721  FDLTMFSPQVIEKSDAVELDAVKGDVKFCDISFKYSDTSPLVLNKLNLHVKPGETIAFIG 900
            FDLT F  +V EK DAV+LD V GDVKFCDISF+Y + SPLVLN LNLH+K GET+A +G
Sbjct: 308  FDLTRFKSKVTEKPDAVDLDHVSGDVKFCDISFRYGENSPLVLNGLNLHIKAGETVALVG 367

Query: 901  PSXXXXXXXXXXXXRLYDPLCGSIL 975
            PS            RLYDPL G IL
Sbjct: 368  PSGGGKTTLIKMLLRLYDPLHGCIL 392


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
            gi|223530130|gb|EEF32042.1| abc transporter, putative
            [Ricinus communis]
          Length = 650

 Score =  395 bits (1016), Expect = e-108
 Identities = 200/325 (61%), Positives = 249/325 (76%)
 Frame = +1

Query: 1    AHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVAD 180
            A + Q + LW AALN+ Y+IRV+VF++VL+R L FFE G+GVS+GDIAYRITA+A+DV+D
Sbjct: 146  ATFGQHSLLWKAALNAGYEIRVHVFERVLKRQLAFFEGGSGVSSGDIAYRITAQAADVSD 205

Query: 181  TVYALINSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAH 360
            T+YAL+N++LPS LQ  AMA++M+ ++PVL+LISA+VIPC++  IA LGE LR+IS +AH
Sbjct: 206  TLYALLNTVLPSALQLSAMASRMLAISPVLSLISAMVIPCMAFAIACLGERLRKISKKAH 265

Query: 361  LTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLRKKRMKALIPQIVQA 540
            L++A LS YLNEVLP++LFVKA+N ELCE +RFQRLAHADL+++ +KK MK LIPQI+Q 
Sbjct: 266  LSIATLSAYLNEVLPAILFVKANNGELCESARFQRLAHADLTEHFKKKNMKVLIPQIIQI 325

Query: 541  IYXXXXXXXXXXXXXXXRSFFDGSRMVSFLTSLFLLVEPIQGIGKAYNELKQGEPAIERL 720
            IY                  FDG  MVSF+TSL  LVEPIQ +GKAYNE KQGEPAIERL
Sbjct: 326  IYFGALFMLCCGSMVVSCGCFDGCSMVSFVTSLVFLVEPIQDVGKAYNEWKQGEPAIERL 385

Query: 721  FDLTMFSPQVIEKSDAVELDAVKGDVKFCDISFKYSDTSPLVLNKLNLHVKPGETIAFIG 900
            FDLTM   +VIEK++AV+LD V GDVKFCD+SF+Y D S LVLN+LNLH+K GETIA IG
Sbjct: 386  FDLTMLKSKVIEKTEAVDLDHVIGDVKFCDVSFRYGDNSSLVLNRLNLHIKAGETIALIG 445

Query: 901  PSXXXXXXXXXXXXRLYDPLCGSIL 975
            PS             LYDP  G IL
Sbjct: 446  PSGGGKTTLVKLLLHLYDPSSGCIL 470


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
            [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
            PREDICTED: ABC transporter B family member 29,
            chloroplastic-like [Cucumis sativus]
          Length = 643

 Score =  387 bits (994), Expect = e-105
 Identities = 196/325 (60%), Positives = 244/325 (75%)
 Frame = +1

Query: 1    AHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVAD 180
            A Y QEAF+WDAALN+ Y+IR+ VF++VL  DL FFE G GVS+GDIAYRITAEASDVAD
Sbjct: 142  ASYCQEAFIWDAALNAIYEIRLRVFERVLAMDLDFFEGGTGVSSGDIAYRITAEASDVAD 201

Query: 181  TVYALINSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAH 360
            TVY+L+N+++PS LQ  AMATQM+ ++PVL+LISALVIPC++LVIA+LGE   +IS  A 
Sbjct: 202  TVYSLLNTVVPSMLQLSAMATQMLAISPVLSLISALVIPCVALVIAYLGERQHRISKMAS 261

Query: 361  LTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLRKKRMKALIPQIVQA 540
            L++A LS YLNEVLP+ LFVKA++AE CE  RFQRLA  DL + L+KK+MKA +P +VQA
Sbjct: 262  LSIANLSSYLNEVLPAFLFVKANSAEFCENIRFQRLARTDLYERLKKKKMKAFVPHVVQA 321

Query: 541  IYXXXXXXXXXXXXXXXRSFFDGSRMVSFLTSLFLLVEPIQGIGKAYNELKQGEPAIERL 720
            +Y               R  F  S MVSF+TSL  L+EP+Q IGKAYNELK+GEPAIERL
Sbjct: 322  LYFVSLSMLFVGLLVVSRGSFSSSSMVSFVTSLGFLIEPVQKIGKAYNELKEGEPAIERL 381

Query: 721  FDLTMFSPQVIEKSDAVELDAVKGDVKFCDISFKYSDTSPLVLNKLNLHVKPGETIAFIG 900
            F+L  F P VIE  DAV+L+ +KG++KFC++SF Y    PLVL+ LNLH+K GET+AF+G
Sbjct: 382  FELIEFKPTVIETHDAVDLNCLKGELKFCNVSFTYGSNMPLVLDGLNLHIKAGETVAFMG 441

Query: 901  PSXXXXXXXXXXXXRLYDPLCGSIL 975
            PS            RLYDPL G+IL
Sbjct: 442  PSGGGKTTLIKLLLRLYDPLSGNIL 466


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