BLASTX nr result

ID: Coptis25_contig00019309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019309
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, ...   174   7e-42
sp|P27793.1|AROC_CORSE RecName: Full=Chorismate synthase, chloro...   169   2e-40
ref|XP_002275232.1| PREDICTED: chorismate synthase, chloroplasti...   166   2e-39
gb|ACM45079.1| chorismate synthase [Vitis vinifera]                   166   2e-39
emb|CAN73646.1| hypothetical protein VITISV_025571 [Vitis vinifera]   166   2e-39

>ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, putative [Ricinus
           communis] gi|223530947|gb|EEF32805.1| Chorismate
           synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 435

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/105 (77%), Positives = 93/105 (88%), Gaps = 3/105 (2%)
 Frame = -3

Query: 307 KTLKISSIRPTSSPR---KLEVHASGNTFGTYFRVTTYGESHGGGVGCVIDGCPPRVPLC 137
           + L IS++R + SPR   KL++HA+G+TFGT+FRVTT+GESHGGGVGC IDGCPPRVPL 
Sbjct: 25  RKLSISTVRISFSPRAPKKLQIHAAGSTFGTHFRVTTFGESHGGGVGCTIDGCPPRVPLS 84

Query: 136 EADMQADLDRRRPGQSRITTPRKETDTCKIYSGVVDGLTTGAPIH 2
           EADMQ DLDRRRPGQSRITTPRKETDTCKIYSGV +G+TTG PIH
Sbjct: 85  EADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGMTTGTPIH 129


>sp|P27793.1|AROC_CORSE RecName: Full=Chorismate synthase, chloroplastic; AltName:
           Full=5-enolpyruvylshikimate-3-phosphate phospholyase;
           Flags: Precursor gi|18256|emb|CAA43034.1| chorismate
           synthase [Capnoides sempervirens]
          Length = 447

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/117 (70%), Positives = 100/117 (85%), Gaps = 2/117 (1%)
 Frame = -3

Query: 346 GLSFFKSSEL--LLQKTLKISSIRPTSSPRKLEVHASGNTFGTYFRVTTYGESHGGGVGC 173
           G S+F++S+L  L  ++++IS +R  ++P KL V ASG++FG  F+VTTYGESHGGGVGC
Sbjct: 24  GWSYFQTSDLRQLSNQSVQIS-VRRQTAPLKLVVQASGSSFGKVFQVTTYGESHGGGVGC 82

Query: 172 VIDGCPPRVPLCEADMQADLDRRRPGQSRITTPRKETDTCKIYSGVVDGLTTGAPIH 2
           VIDGCPPR P+ EAD+Q+DLDRRRPGQSRITTPRKETDTCKIYSGV DG TTG+PIH
Sbjct: 83  VIDGCPPRFPISEADIQSDLDRRRPGQSRITTPRKETDTCKIYSGVADGFTTGSPIH 139


>ref|XP_002275232.1| PREDICTED: chorismate synthase, chloroplastic [Vitis vinifera]
           gi|296086029|emb|CBI31470.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 289 SIRPTSSPRKLEVHASGNTFGTYFRVTTYGESHGGGVGCVIDGCPPRVPLCEADMQADLD 110
           +IRPT   R LE+ A+G+T+GTYFRVTTYGESHGGGVGC+IDGCPPR+PL EADMQ DLD
Sbjct: 36  AIRPTHR-RTLEIQAAGSTYGTYFRVTTYGESHGGGVGCIIDGCPPRLPLTEADMQIDLD 94

Query: 109 RRRPGQSRITTPRKETDTCKIYSGVVDGLTTGAPI 5
           RRRPGQSRITTPRKETDTC+IYSGV +G+TTG+PI
Sbjct: 95  RRRPGQSRITTPRKETDTCRIYSGVAEGMTTGSPI 129


>gb|ACM45079.1| chorismate synthase [Vitis vinifera]
          Length = 436

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 289 SIRPTSSPRKLEVHASGNTFGTYFRVTTYGESHGGGVGCVIDGCPPRVPLCEADMQADLD 110
           +IRPT   R LE+ A+G+T+GTYFRVTTYGESHGGGVGC+IDGCPPR+PL EADMQ DLD
Sbjct: 36  AIRPTHR-RTLEIQAAGSTYGTYFRVTTYGESHGGGVGCIIDGCPPRLPLTEADMQIDLD 94

Query: 109 RRRPGQSRITTPRKETDTCKIYSGVVDGLTTGAPI 5
           RRRPGQSRITTPRKETDTC+IYSGV +G+TTG+PI
Sbjct: 95  RRRPGQSRITTPRKETDTCRIYSGVAEGMTTGSPI 129


>emb|CAN73646.1| hypothetical protein VITISV_025571 [Vitis vinifera]
          Length = 436

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 289 SIRPTSSPRKLEVHASGNTFGTYFRVTTYGESHGGGVGCVIDGCPPRVPLCEADMQADLD 110
           +IRPT   R LE+ A+G+T+GTYFRVTTYGESHGGGVGC+IDGCPPR+PL EADMQ DLD
Sbjct: 36  AIRPTHR-RTLEIQAAGSTYGTYFRVTTYGESHGGGVGCIIDGCPPRLPLTEADMQIDLD 94

Query: 109 RRRPGQSRITTPRKETDTCKIYSGVVDGLTTGAPI 5
           RRRPGQSRITTPRKETDTC+IYSGV +G+TTG+PI
Sbjct: 95  RRRPGQSRITTPRKETDTCRIYSGVAEGMTTGSPI 129


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