BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019306
         (1884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   422   e-115
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   397   e-108
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   387   e-105
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   384   e-104
ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   378   e-102

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  422 bits (1085), Expect = e-115
 Identities = 231/478 (48%), Positives = 296/478 (61%), Gaps = 22/478 (4%)
 Frame = +1

Query: 127  MATVSPIKEQV------------TPTPVLPTNKNKETANSSDSKL-----QESSNDVITI 255
            MA  SPIK+ +            + + ++PT K++    +S S       + S  + I I
Sbjct: 1    MAAQSPIKDPIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGIVPRASEPETINI 60

Query: 256  PSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQV 435
            PS+SRWFSW+ VHECE R LPEFF+ R P KNP+VY Y RNSII  FR++PSRK+TFT V
Sbjct: 61   PSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDV 120

Query: 436  RKVLVGDVGSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENKXXXXXXXXXXXX----K 603
            RK+LVGDVGS RRVFDFLE WGLINY+G+  K   K ++K+NK                +
Sbjct: 121  RKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGASSHTGDAGGGAVE 180

Query: 604  KETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMSE 783
                +R+CS CK++CSIACF  DK D TLCARC+VRG YR+G +++DFRRVEISE   + 
Sbjct: 181  SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRRVEISEDTKAG 240

Query: 784  WTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAV-VE 960
            WTDKETL+LLEAV HYGDDWKKVAEHVGGR EKECV  F+KL F EQ++    S  V  +
Sbjct: 241  WTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSSGDVDNK 300

Query: 961  YQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXX 1140
            + Q +  S+A  G++N  +SS +KK RLTP SD SNPIMAQ AFLSA+            
Sbjct: 301  FSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVAEAAARA 360

Query: 1141 XXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDMNRLXXXXXXXXXXXXXX 1320
                LSD     D R+++    S        +    +NG+   N L              
Sbjct: 361  AVASLSD----VDPRKMKEGLGSFANGARIQDPNVESNGNTTSNVLEGAYVDAKSLLERE 416

Query: 1321 XXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLQLMKNLLFADELSLLFKR 1494
                 R+I+ I  VQMK+++DKI  FEE EL +EKEW+QLQ MKNLLF D+L+LLF++
Sbjct: 417  ELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQLTLLFQK 474


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  397 bits (1020), Expect = e-108
 Identities = 222/479 (46%), Positives = 285/479 (59%), Gaps = 23/479 (4%)
 Frame = +1

Query: 127  MATVSPIKEQVTP-----TPVLPTNKNKETANSSDSKLQ----ESSNDVITIPSHSRWFS 279
            MA+VSP    + P     + V P  +   TA  S    Q     S  DV+ IPS+SRWFS
Sbjct: 1    MASVSPAPPSLHPKIPLSSTVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS 60

Query: 280  WDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDV 459
            WD +HECE R LPEFF+ R P KNP VY Y RNSII  FRK+PS K+TFT++RK LVGDV
Sbjct: 61   WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV 120

Query: 460  GSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENK-------------XXXXXXXXXXXX 600
            GS RRVFDFL+ WGLINY+  + K     D K++                          
Sbjct: 121  GSIRRVFDFLDAWGLINYS-PLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASN 179

Query: 601  KKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMS 780
             K+  KR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++DFRRVEISE+  +
Sbjct: 180  TKDNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEART 239

Query: 781  EWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAV-V 957
            +WT+KETL LLEAV HY DDWKKVA+HVGGR+EK+C+  F+KLPF E F    D   V  
Sbjct: 240  DWTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDS 299

Query: 958  EYQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXX 1137
            +Y Q +   + E+G + + S S +KK RL+P  D SNPIMAQ AFLSA+           
Sbjct: 300  KYNQIKDCDDDESGRNGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAAR 359

Query: 1138 XXXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDMNRLXXXXXXXXXXXXX 1317
                 L++      +  +E     +     H +S   +NG  +++               
Sbjct: 360  AAVTTLTEVEYGGSKGSLE----FVSRVTKHLDSGVASNGDTNLSASVKACLDANSLLEK 415

Query: 1318 XXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLQLMKNLLFADELSLLFKR 1494
                  R+I+ I  VQMK++QDKI +FEE++LQ+EKEW+QL  MKNLLFAD+LS+L KR
Sbjct: 416  EESDVERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKR 474


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  387 bits (993), Expect = e-105
 Identities = 216/461 (46%), Positives = 280/461 (60%), Gaps = 9/461 (1%)
 Frame = +1

Query: 139  SPIKEQVTPTPVLPTNKNKETANSSDSKLQESSNDVITIPSHSRWFSWDKVHECERRSLP 318
            +P   +  P PV   +  K  A  SDSK    +N VI +PS+SRWFSWD + ECE R LP
Sbjct: 18   APPPPKQPPQPVAAASAVKPEAPLSDSKASAEAN-VIVVPSYSRWFSWDSIDECEVRHLP 76

Query: 319  EFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDVGSTRRVFDFLEGW 498
            EFFE     K+P+VY Y RNSI+K FR +P+RKITFT VRK LVGDVGS RRVFDFLE W
Sbjct: 77   EFFESAS--KSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETW 134

Query: 499  GLINYTGAVQKSHS-KLDDKENKXXXXXXXXXXXXK--KETSKRFCSLCKTVCSIACFVS 669
            GLINY  +   +   K DDKE K               KE +KR CS CK VC+IACF  
Sbjct: 135  GLINYHPSSSLTKPLKWDDKETKSDSASNTTESSSAPAKENTKRLCSGCKVVCTIACFAC 194

Query: 670  DKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMSEWTDKETLNLLEAVTHYGDDWKK 849
            DK D TLCARC+VRG YR+G +++DFRRVEISE+  ++W +KET NLLEA+THY DDWK+
Sbjct: 195  DKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKR 254

Query: 850  VAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAVVEYQQTRTP------SEAETGEDNS 1011
            V++HV GRTEKECVA F+KLPF +QF       AV     +  P      ++AE+  D  
Sbjct: 255  VSQHVPGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELDTV 314

Query: 1012 ISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRI 1191
             S+ P K+ RLTP +D SNPIMAQ AFLSA+                LS+    T   +I
Sbjct: 315  ASAEPNKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKAT---KI 371

Query: 1192 ERRSNSLPEKRDHYESASGANGSDDMNRLXXXXXXXXXXXXXXXXXXXRSITDILGVQMK 1371
              R  S P      ++   +NG +  +                     ++I++I+ VQMK
Sbjct: 372  NYR--SFPRNTLLQDAGIMSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVQMK 429

Query: 1372 DLQDKIFQFEEIELQVEKEWEQLQLMKNLLFADELSLLFKR 1494
            ++QDK+ QFE+++L +EKE +QL+ MKN+ F D+L+LLF +
Sbjct: 430  NIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHK 470


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  384 bits (985), Expect = e-104
 Identities = 222/509 (43%), Positives = 299/509 (58%), Gaps = 41/509 (8%)
 Frame = +1

Query: 127  MATVSPIKEQVT----------PTPVLPTNKNKETANSSDSKL----------------Q 228
            MA  SP+++  T          P+P L T   K     SDS                  Q
Sbjct: 1    MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 60

Query: 229  ESSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHP 408
             +S D I +PS+SRWFSW+ +HECE R LPEFF+ R P KNP+VY Y+RNSI+K FR+ P
Sbjct: 61   STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 120

Query: 409  SRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENKXXXXXXXX 588
            S+KITFT +RK LV DVGS RRVFDFLE WGLINY+ +      K DD+++K        
Sbjct: 121  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 180

Query: 589  XXXX--------KKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNND 744
                         K+ SKR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++D
Sbjct: 181  GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240

Query: 745  FRRVEISEQNMSEWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQ 924
            FRRVEI++   ++WTDKETL+LLEA+THYGDDWKKVA+HVGGRTE+ECVA+FVKLP  EQ
Sbjct: 241  FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 300

Query: 925  FISRPDSLAV-----VEYQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVA 1089
            F   PDS  +     V+ + +   +   TG+    +S P K+ RL+P +D SNPIMAQ A
Sbjct: 301  FHGYPDSEHIDNNCTVKDEASANLTLESTGKIG--TSIPNKRIRLSPLADASNPIMAQAA 358

Query: 1090 FLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGA--NGSD 1263
            FLS++                LS+ +   D         ++P  R+  E  + A  +G  
Sbjct: 359  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGD------GEIAIPVARNIGEQGNDAASHGGS 412

Query: 1264 DMNRLXXXXXXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLQ 1443
             ++R                    ++I+ I+ VQMK++ DK+  FEE ELQ+EK ++QL 
Sbjct: 413  CLSR-------------GSTMDMEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQLD 459

Query: 1444 LMKNLLFADELSLLFKRPTLFASSGDSTN 1530
             MK++LF D+L+LLF +  +  +  + +N
Sbjct: 460  QMKSMLFVDQLNLLFNKECISTTVEEKSN 488


>ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 484

 Score =  378 bits (971), Expect = e-102
 Identities = 213/464 (45%), Positives = 279/464 (60%), Gaps = 13/464 (2%)
 Frame = +1

Query: 142  PIKEQVTPTPVLPTNKN----KETANSSDSKLQESSNDVITIPSHSRWFSWDKVHECERR 309
            P K+   P P  P        K  A   DSK    +N VI +PS+SRWFSWD + ECE R
Sbjct: 21   PPKQPPPPAPQPPAAAAAAAVKPEAPLPDSKTSAEAN-VIVVPSYSRWFSWDSIDECEAR 79

Query: 310  SLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDVGSTRRVFDFL 489
             LPEFFE     K+P+VY Y RNSI+K FR +P+RKITFT VRK LVGDVGS RRVFDFL
Sbjct: 80   HLPEFFESAS--KSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFL 137

Query: 490  EGWGLINYTGAVQKSHS-KLDDKENKXXXXXXXXXXXXK--KETSKRFCSLCKTVCSIAC 660
            E WGLINY  +   +   K DDKE K               KE +KR CS CK VC+IAC
Sbjct: 138  ETWGLINYHPSSSLTKPLKWDDKETKSDSASNSTESSSAPVKENTKRLCSGCKVVCTIAC 197

Query: 661  FVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMSEWTDKETLNLLEAVTHYGDD 840
            F  DK D TLCARC+VRG YR+G +++DFRRVEISE+  ++W++KE  NLLEA++HYGDD
Sbjct: 198  FACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWSEKEITNLLEAISHYGDD 257

Query: 841  WKKVAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAV------VEYQQTRTPSEAETGE 1002
            WK+V++HV GRTEKECVA F+KLPFA QF       AV          +  T ++AE+  
Sbjct: 258  WKRVSQHVPGRTEKECVAHFLKLPFANQFQHYQQHPAVNGTDDGCNLLKMVTNADAESEL 317

Query: 1003 DNSISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQ 1182
            D   S+ P+K+ RLTP +D SNPIMAQ AFLSA+                LS+    T  
Sbjct: 318  DTVASAEPSKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKAT-- 375

Query: 1183 RRIERRSNSLPEKRDHYESASGANGSDDMNRLXXXXXXXXXXXXXXXXXXXRSITDILGV 1362
             +I  R  + P      ++   +NG +  +                     ++I++I+ V
Sbjct: 376  -KINYR--AFPRNTLLQDAGITSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEV 432

Query: 1363 QMKDLQDKIFQFEEIELQVEKEWEQLQLMKNLLFADELSLLFKR 1494
            QMK++QDK+  FE+++L +EKE +Q++ MKN+ F D+L+LLF +
Sbjct: 433  QMKNIQDKLVHFEDLDLLMEKEGQQMEQMKNMFFLDQLTLLFHK 476