BLASTX nr result

ID: Coptis25_contig00019286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019286
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254...    74   1e-11
ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002528756.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|AFW64831.1| hypothetical protein ZEAMMB73_149596 [Zea mays]         60   2e-07

>ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254636 [Vitis vinifera]
          Length = 160

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
 Frame = +1

Query: 1   VRIKIVITKQELKEMLAKGGIPSVDDMVSQLQKKT------KDEVDCDRNCNGWKPVLQS 162
           VRI++VITKQELKEML KGG+ SVD MVSQLQ+        K +VD + NC GWKPVL+S
Sbjct: 97  VRIRLVITKQELKEMLRKGGV-SVDHMVSQLQRGQGRNGVHKLDVDGNGNCRGWKPVLES 155

Query: 163 IPE 171
           IPE
Sbjct: 156 IPE 158


>ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|222868058|gb|EEF05189.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/58 (63%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   VRIKIVITKQELKEMLAKGGIPSVDDMVSQLQKKTK-DEVDCDRNCNGWKPVLQSIPE 171
           VRIK+VI+KQEL EML KGG+ SVDDMVSQL  + +  +VD     N WKPVL+SIPE
Sbjct: 100 VRIKLVISKQELVEMLRKGGV-SVDDMVSQLHGQQRVQKVDIPDVVNTWKPVLESIPE 156


>ref|XP_002528756.1| conserved hypothetical protein [Ricinus communis]
           gi|223531850|gb|EEF33668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 7/64 (10%)
 Frame = +1

Query: 1   VRIKIVITKQELKEMLAKGGIPSVDDMVSQLQKK-------TKDEVDCDRNCNGWKPVLQ 159
           VRIK+VI+KQEL+E+L KGG+ SVD M+SQLQ +       T D  DC +   GWKPVL+
Sbjct: 96  VRIKLVISKQELQEILRKGGV-SVDYMISQLQGQQRVHRVDTSDNDDCHK---GWKPVLE 151

Query: 160 SIPE 171
           SIPE
Sbjct: 152 SIPE 155


>ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|222854452|gb|EEE91999.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = +1

Query: 1   VRIKIVITKQELKEMLAKGGIPSVDDMVSQLQKKTK----DEVDCDRNCNGWKPVLQSIP 168
           VRIK+VI+KQEL+EML KGG+ SVDDMVS LQ + +    D    D    GWKP L+SIP
Sbjct: 102 VRIKLVISKQELQEMLRKGGV-SVDDMVSHLQGQQRVQKVDISGSDSEHKGWKPELESIP 160

Query: 169 E 171
           E
Sbjct: 161 E 161


>gb|AFW64831.1| hypothetical protein ZEAMMB73_149596 [Zea mays]
          Length = 127

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
 Frame = +1

Query: 1   VRIKIVITKQELKEMLAKGGIPSVDDMVSQLQKKTKDEVDCDRN--CNGWKPVLQSIPE 171
           VR+K+VI+KQEL++ML K G+ S+DDMVS L +K     D ++   C GW+P L+SIPE
Sbjct: 66  VRVKLVISKQELRKMLDKEGV-SLDDMVSSLVRKEASGGDREQELCCGGWRPALESIPE 123


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