BLASTX nr result

ID: Coptis25_contig00019276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019276
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24760.3| unnamed protein product [Vitis vinifera]              118   6e-25
emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]   118   6e-25
ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002533351.1| conserved hypothetical protein [Ricinus comm...   114   6e-24

>emb|CBI24760.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/72 (75%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +3

Query: 267 LKSTLLCSQCSKCDTSKCPPTEAYPHMTAWDDSLIAGALQSDYVGIKDRGVYSVPSVKGG 446
           LKS  LCSQCSKC++S CP +E+YPHMTA+DD+LIAGALQSDYV   DRGVYSVP +KGG
Sbjct: 24  LKSDGLCSQCSKCESSTCPASESYPHMTAYDDTLIAGALQSDYVDSDDRGVYSVPDIKGG 83

Query: 447 ES-KYNAYYGWK 479
           ES KYN+Y+GWK
Sbjct: 84  ESNKYNSYFGWK 95


>emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]
          Length = 231

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/72 (75%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +3

Query: 267 LKSTLLCSQCSKCDTSKCPPTEAYPHMTAWDDSLIAGALQSDYVGIKDRGVYSVPSVKGG 446
           LKS  LCSQCSKC++S CP +E+YPHMTA+DD+LIAGALQSDYV   DRGVYSVP +KGG
Sbjct: 24  LKSDGLCSQCSKCESSTCPASESYPHMTAYDDTLIAGALQSDYVDSDDRGVYSVPDIKGG 83

Query: 447 ES-KYNAYYGWK 479
           ES KYN+Y+GWK
Sbjct: 84  ESNKYNSYFGWK 95


>ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|222853280|gb|EEE90827.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +3

Query: 267 LKSTLLCSQCSKCDTSKCPPTEAYPHMTAWDDSLIAGALQSDYVGIKDRGVYSVPSVKGG 446
           LKS  LC QCSK DT+KCP +EAYPHMTA+DD+LIAGALQSDYV   DRGVYSVP +KGG
Sbjct: 23  LKSDNLCRQCSKRDTNKCPASEAYPHMTAFDDTLIAGALQSDYVDANDRGVYSVPDIKGG 82

Query: 447 -ESKYNAYYGWK 479
             SKYNAY+GW+
Sbjct: 83  TSSKYNAYFGWE 94


>ref|XP_002533351.1| conserved hypothetical protein [Ricinus communis]
           gi|223526816|gb|EEF29036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +3

Query: 252 VANAELKSTLLCSQCSKCDTSKCPPTEAYPHMTAWDDSLIAGALQSDYVGIKDRGVYSVP 431
           VA   LKS  LC QC KCDT +CP ++AYPHMTA DD+LIAGALQSD+V + DRGVYSVP
Sbjct: 26  VAVDGLKSDKLCGQCRKCDTKQCPASDAYPHMTAHDDTLIAGALQSDFVDVNDRGVYSVP 85

Query: 432 SVKGGES-KYNAYYGWK 479
            +KGG S KYNAY+GW+
Sbjct: 86  DIKGGTSAKYNAYFGWE 102


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