BLASTX nr result

ID: Coptis25_contig00019262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019262
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159146.1| PREDICTED: RING finger protein 10-like [Cucu...    65   7e-09
ref|XP_004145702.1| PREDICTED: RING finger protein 10-like [Cucu...    65   7e-09
ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glyc...    61   1e-07
ref|XP_003624500.1| RING finger protein [Medicago truncatula] gi...    61   1e-07
ref|XP_003553982.1| PREDICTED: RING finger protein 10-like [Glyc...    59   3e-07

>ref|XP_004159146.1| PREDICTED: RING finger protein 10-like [Cucumis sativus]
          Length = 654

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +1

Query: 19  TLSFANIISTTKSPESREIPKIDALVGKKGKKPNRVLLSTAGGRRY 156
           T SFAN+IS  KS  S E PK + +VGKKGKKP+RVLLSTAGGRRY
Sbjct: 609 TPSFANVISRAKSGGSIESPKANEVVGKKGKKPSRVLLSTAGGRRY 654


>ref|XP_004145702.1| PREDICTED: RING finger protein 10-like [Cucumis sativus]
          Length = 742

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +1

Query: 19  TLSFANIISTTKSPESREIPKIDALVGKKGKKPNRVLLSTAGGRRY 156
           T SFAN+IS  KS  S E PK + +VGKKGKKP+RVLLSTAGGRRY
Sbjct: 697 TPSFANVISRAKSGGSIESPKANEVVGKKGKKPSRVLLSTAGGRRY 742


>ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glycine max]
          Length = 838

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = +1

Query: 1   GKRNMVTLSFANIISTTKSPESREIPKIDALVGKKGKKPNRVLLSTAGGRRY 156
           G RN  T S++N+IS  +S  S   PK + L GKKGKKPNRVLLSTAGGRRY
Sbjct: 788 GLRNGETQSYSNVISRAESNISSNAPKTNEL-GKKGKKPNRVLLSTAGGRRY 838


>ref|XP_003624500.1| RING finger protein [Medicago truncatula]
           gi|355499515|gb|AES80718.1| RING finger protein
           [Medicago truncatula]
          Length = 744

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +1

Query: 1   GKRNMVTLSFANIISTTKSPESREIPKIDALVGKKGKKPNRVLLSTAGGRRY 156
           G RN  TLS++N+IS  +S  +   PK + L GKKGKKPNRVLLST+GGRRY
Sbjct: 694 GLRNGETLSYSNVISRAESNGTSNAPKTNDL-GKKGKKPNRVLLSTSGGRRY 744


>ref|XP_003553982.1| PREDICTED: RING finger protein 10-like [Glycine max]
          Length = 747

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = +1

Query: 1   GKRNMVTLSFANIISTTKSPESREIPKIDALVGKKGKKPNRVLLSTAGGRRY 156
           G RN  T S++N  S T+S  S   PK + L GKKGKKPNRVLLSTAGGRRY
Sbjct: 697 GLRNGETQSYSNATSRTESNISSNAPKTNEL-GKKGKKPNRVLLSTAGGRRY 747


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