BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019253
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   277   2e-72
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   266   3e-69
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   257   2e-66
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   249   4e-64
ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp....   244   2e-62

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  277 bits (709), Expect = 2e-72
 Identities = 136/221 (61%), Positives = 178/221 (80%)
 Frame = -1

Query: 781 ICSLCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEG 602
           I SLC++  TV LALE+LNDF G+A+KYA+K FS VI GL RIKD++ AK++LSKMI EG
Sbjct: 246 IGSLCRDDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEG 305

Query: 601 PPPDSAVFNSIINGLLKAGDLDEAMGLLKVMESRGLRPNVSTYSVLMSDFVKGGQMGEAR 422
           PPP +AVFN++I+G  K GD+ EA+ ++K+MESRGL+P+V TY+V++S +  GGQM EA 
Sbjct: 306 PPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEAC 365

Query: 421 SFLSEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQSL 242
             LSEAKKKH+KL PVT+H L RGYCKL++FDKA+ELL EM+ +GV PNA+EYNK+IQSL
Sbjct: 366 YILSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSL 425

Query: 241 CTPKGLDWRTADKLFENMEEKGLYLSAMNQHLIKTIKRWEE 119
           C  K LDW TA+KLF  M+EKGLYL+++ + LI  +K  E+
Sbjct: 426 CL-KSLDWGTAEKLFAEMKEKGLYLNSITRSLITAVKELEQ 465



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
 Frame = -1

Query: 781 ICSLCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEG 602
           + +L  ++   K ALE+ +           + +   I  L R    + A  V  KM+D+G
Sbjct: 140 LIALLSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQG 199

Query: 601 PPPDSAVFNSIINGLLKAGDLDEAMGL-LKVMESRGLRPNVSTYSVLMSDFVKGGQMGEA 425
           P PDS     II    K     +A  + L   E     P  + Y ++ S     G +  A
Sbjct: 200 PLPDSEKIGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLA 259

Query: 424 RSFLSEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQS 245
              L++ + +  K     F  + RG C++++ D A +LL +M   G  P    +N +I  
Sbjct: 260 LEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISG 319

Query: 244 LCTPKGLDWRTADKLFENMEEKGL 173
            C  KG D + A ++ + ME +GL
Sbjct: 320 YC--KGGDMKEAIEIMKLMESRGL 341


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  266 bits (681), Expect = 3e-69
 Identities = 128/221 (57%), Positives = 175/221 (79%)
 Frame = -1

Query: 781 ICSLCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEG 602
           I SLC+E  T+ +A+E+L+DFSG+  KYA+K ++ VI GL R KD++ AK++L KMI+ G
Sbjct: 318 IASLCREDGTISMAVEMLDDFSGEECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAG 377

Query: 601 PPPDSAVFNSIINGLLKAGDLDEAMGLLKVMESRGLRPNVSTYSVLMSDFVKGGQMGEAR 422
           PPP +AVFN +INGL KAG+++EAM ++K+ME+RGL+P+V TYSV+MS +  GG M EA 
Sbjct: 378 PPPGNAVFNFVINGLSKAGEMEEAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEAC 437

Query: 421 SFLSEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQSL 242
             LSEAK+ H+KL PVT+H L RGYCKLE+FDKAVELL EM+++GV PN +EYNK+IQSL
Sbjct: 438 RVLSEAKRNHSKLSPVTYHTLIRGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSL 497

Query: 241 CTPKGLDWRTADKLFENMEEKGLYLSAMNQHLIKTIKRWEE 119
           C  K LDW+TA+KL E M++ GL+L+ + + LI+ +K  EE
Sbjct: 498 CL-KALDWQTAEKLLEEMKQNGLHLNGITRGLIRAVKELEE 537


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  257 bits (656), Expect = 2e-66
 Identities = 127/218 (58%), Positives = 168/218 (77%)
 Frame = -1

Query: 772  LCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEGPPP 593
            LC++ +TVKLALE+L+ FSG  RKYA+K FS VI  L RIKD++ AK +LSKM+DEGPPP
Sbjct: 357  LCQKNETVKLALEMLDAFSGPKRKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPP 416

Query: 592  DSAVFNSIINGLLKAGDLDEAMGLLKVMESRGLRPNVSTYSVLMSDFVKGGQMGEARSFL 413
             +AVFNSIING  K GD+ EA+ + ++M  RGL+P++ TY+V+MS +  GGQM EA   L
Sbjct: 417  GNAVFNSIINGYSKCGDMKEAIKMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVL 476

Query: 412  SEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQSLCTP 233
            SEAKKKH+KL PV +H + RGYCKLE+FDKA++LL EM+ +GV  NA+EYNK+IQSLC  
Sbjct: 477  SEAKKKHSKLSPVMYHTVIRGYCKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCL- 535

Query: 232  KGLDWRTADKLFENMEEKGLYLSAMNQHLIKTIKRWEE 119
            K LDW  A+KL E M+E GL+L+ + + LI+ +K  E+
Sbjct: 536  KALDWERAEKLLEKMKEDGLHLNGITRGLIRAVKELED 573


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  249 bits (637), Expect = 4e-64
 Identities = 123/221 (55%), Positives = 169/221 (76%)
 Frame = -1

Query: 781 ICSLCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEG 602
           I SLC++ +TVKLALE+LNDFS   R+ A+K +  VI  L RIKD  +AK +L KMI EG
Sbjct: 248 IHSLCRDDETVKLALEMLNDFSTGERRRAIKPYMEVIRSLCRIKDTSKAKTLLQKMIAEG 307

Query: 601 PPPDSAVFNSIINGLLKAGDLDEAMGLLKVMESRGLRPNVSTYSVLMSDFVKGGQMGEAR 422
           PPP +A FN++I G  KAGDL+EAM L+K+MESRGL+P+V +Y+ ++S + KGGQM EA 
Sbjct: 308 PPPGNAAFNAVICGYSKAGDLEEAMELIKLMESRGLKPDVYSYTAVISGYAKGGQMKEAY 367

Query: 421 SFLSEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQSL 242
             L EAKKKHAKL  +T+H L R +CKLEE+D A++LL EM+++GV PN +EYNK+I+SL
Sbjct: 368 EVLDEAKKKHAKLSHITYHTLIRNHCKLEEYDSALKLLSEMKNFGVQPNVDEYNKLIRSL 427

Query: 241 CTPKGLDWRTADKLFENMEEKGLYLSAMNQHLIKTIKRWEE 119
           C  K +DWRT+++LFE M+E GL+L+ + + LI+ ++  EE
Sbjct: 428 CL-KAVDWRTSERLFEEMKENGLHLNGITRGLIRAVRELEE 467


>ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328085|gb|EFH58504.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1091

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/220 (54%), Positives = 164/220 (74%)
 Frame = -1

Query: 781  ICSLCKEVDTVKLALELLNDFSGDARKYAMKAFSCVIGGLFRIKDIEEAKKVLSKMIDEG 602
            I +LCK   T+  A E+L D SG+AR+  +K FS VI  L R++++++AK +L  MI +G
Sbjct: 858  ISALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKSLLLDMISKG 917

Query: 601  PPPDSAVFNSIINGLLKAGDLDEAMGLLKVMESRGLRPNVSTYSVLMSDFVKGGQMGEAR 422
            P P +AVFN I++   K GDLDEA  +LK+MESRGL+P+V TY+V++S + KGG M EA+
Sbjct: 918  PAPGNAVFNLIVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMNEAQ 977

Query: 421  SFLSEAKKKHAKLCPVTFHILARGYCKLEEFDKAVELLIEMQDYGVYPNAEEYNKMIQSL 242
              L+EAKKKH KL PVT+H L RGYCK+EE+D+A++LL EM  +GV PNA+EYNK+IQS 
Sbjct: 978  EILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLKEMDRFGVQPNADEYNKLIQSF 1037

Query: 241  CTPKGLDWRTADKLFENMEEKGLYLSAMNQHLIKTIKRWE 122
            C  K LDW  A+ LFE M++KGL+L+A++Q LI+ +K  E
Sbjct: 1038 CL-KALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEME 1076