BLASTX nr result

ID: Coptis25_contig00019252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019252
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    60   1e-07
ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [S...    60   1e-07
ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG3...    60   1e-07
gb|AFK35502.1| unknown [Medicago truncatula]                           60   2e-07
gb|ACU20887.1| unknown [Glycine max]                                   60   2e-07

>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = -3

Query: 296 SEEDAKKRIYIVGCNAPFGFCAEISVEMLNKLNGLPNVIALLPDCTFHDKNKDCG 132
           SEE+AKK+IY V C   FGF  EI  E  NKL GLP V+ +LPD     +NKD G
Sbjct: 127 SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYG 181


>ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
           gi|241938232|gb|EES11377.1| hypothetical protein
           SORBIDRAFT_06g027510 [Sorghum bicolor]
          Length = 216

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = -3

Query: 296 SEEDAKKRIYIVGCNAPFGFCAEISVEMLNKLNGLPNVIALLPDCTFHDKNKDCG 132
           SEE+AKKRIY V C   FGF  EI  E  NKL GLP V+ +LPD     +NKD G
Sbjct: 112 SEEEAKKRIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYG 166


>ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG35585.1| DAG protein
           [Zea mays] gi|223973333|gb|ACN30854.1| unknown [Zea
           mays]
          Length = 215

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 35/55 (63%)
 Frame = -3

Query: 296 SEEDAKKRIYIVGCNAPFGFCAEISVEMLNKLNGLPNVIALLPDCTFHDKNKDCG 132
           SEE+AKKRIY V C   FGF  EI  E  NKL GLP V+ +LPD     +NKD G
Sbjct: 111 SEEEAKKRIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYG 165


>gb|AFK35502.1| unknown [Medicago truncatula]
          Length = 217

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = -3

Query: 296 SEEDAKKRIYIVGCNAPFGFCAEISVEMLNKLNGLPNVIALLPDCTFHDKNKDCG 132
           SEE+AKK+IY V C   FGF  EI  E  NKL GLP V+ +LPD     +NKD G
Sbjct: 116 SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYG 170


>gb|ACU20887.1| unknown [Glycine max]
          Length = 116

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = -3

Query: 296 SEEDAKKRIYIVGCNAPFGFCAEISVEMLNKLNGLPNVIALLPDCTFHDKNKDCG 132
           SEE+AKK+IY V C   FGF  EI  E  NKL GLP V+ +LPD     +NKD G
Sbjct: 28  SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYG 82


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