BLASTX nr result

ID: Coptis25_contig00019245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019245
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273260.1| PREDICTED: nicalin-1 [Vitis vinifera] gi|296...   114   5e-50
dbj|BAG15862.1| hypothetical protein [Bruguiera gymnorhiza]           112   4e-49
ref|XP_002523845.1| Nicalin precursor, putative [Ricinus communi...   109   6e-48
ref|XP_003540807.1| PREDICTED: nicalin-like [Glycine max]             109   6e-48
ref|XP_003538104.1| PREDICTED: nicalin-1-like [Glycine max]           107   2e-46

>ref|XP_002273260.1| PREDICTED: nicalin-1 [Vitis vinifera] gi|296084876|emb|CBI28285.3|
           unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  114 bits (285), Expect(2) = 5e-50
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = -2

Query: 586 RHIYGHSGKNIEIFADDSSLAVNPSYISSWLNLLSQTPRVAPFLTNNDPFILALKKELGD 407
           RHIYGH GKNI+IFADDSSLAVNPSYI SWL+LLS+TPRVAPF + NDPFILALKKEL D
Sbjct: 424 RHIYGHEGKNIQIFADDSSLAVNPSYIQSWLHLLSRTPRVAPFCSKNDPFILALKKELAD 483

Query: 406 HT 401
           HT
Sbjct: 484 HT 485



 Score =  110 bits (276), Expect(2) = 5e-50
 Identities = 56/84 (66%), Positives = 63/84 (75%)
 Frame = -3

Query: 345 ELGDHTAEVNVQQDVLDGIFTFYDSTTAKLTIYQXXXXXXXXXXXXXVGSYLIILFSGLV 166
           EL DHT EVNVQ +VLDG+FTFYDST A+L IYQ             +GSYLI+LFS LV
Sbjct: 480 ELADHTVEVNVQHEVLDGMFTFYDSTKARLNIYQVASVTFDLLLLLVLGSYLIVLFSFLV 539

Query: 165 ITTRGVDDLIGIFRRPPSRKQKTA 94
           ITTRG+DDLI +FRRPPSRK KTA
Sbjct: 540 ITTRGLDDLISLFRRPPSRKLKTA 563


>dbj|BAG15862.1| hypothetical protein [Bruguiera gymnorhiza]
          Length = 567

 Score =  112 bits (279), Expect(2) = 4e-49
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -2

Query: 586 RHIYGHSGKNIEIFADDSSLAVNPSYISSWLNLLSQTPRVAPFLTNNDPFILALKKELGD 407
           RHIYGH GK+IEIFADDSSLAVNPSYI SWL+LLS+TPRVAPFL+ NDP I+ALKKEL D
Sbjct: 428 RHIYGHEGKDIEIFADDSSLAVNPSYIHSWLDLLSRTPRVAPFLSKNDPLIMALKKELAD 487

Query: 406 HT 401
           HT
Sbjct: 488 HT 489



 Score =  110 bits (274), Expect(2) = 4e-49
 Identities = 57/84 (67%), Positives = 62/84 (73%)
 Frame = -3

Query: 345 ELGDHTAEVNVQQDVLDGIFTFYDSTTAKLTIYQXXXXXXXXXXXXXVGSYLIILFSGLV 166
           EL DHT E NVQ +VLDG+FTFYDST AKL IYQ             +GSYLIILFS LV
Sbjct: 484 ELADHTHEANVQHEVLDGMFTFYDSTKAKLNIYQVASVTFDLLLLLVLGSYLIILFSFLV 543

Query: 165 ITTRGVDDLIGIFRRPPSRKQKTA 94
           ITTRG+DDLI +FRRPPSRK KTA
Sbjct: 544 ITTRGLDDLISLFRRPPSRKVKTA 567


>ref|XP_002523845.1| Nicalin precursor, putative [Ricinus communis]
           gi|223536933|gb|EEF38571.1| Nicalin precursor, putative
           [Ricinus communis]
          Length = 559

 Score =  109 bits (273), Expect(2) = 6e-48
 Identities = 56/84 (66%), Positives = 62/84 (73%)
 Frame = -3

Query: 345 ELGDHTAEVNVQQDVLDGIFTFYDSTTAKLTIYQXXXXXXXXXXXXXVGSYLIILFSGLV 166
           EL DH  EVNVQ +VLDG+FTFYDST AKL IYQ             +GSYLI+LFS LV
Sbjct: 476 ELEDHVQEVNVQHEVLDGMFTFYDSTKAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLV 535

Query: 165 ITTRGVDDLIGIFRRPPSRKQKTA 94
           ITTRG+DDLI +FRRPPSRK KTA
Sbjct: 536 ITTRGLDDLISLFRRPPSRKMKTA 559



 Score =  108 bits (270), Expect(2) = 6e-48
 Identities = 50/61 (81%), Positives = 56/61 (91%)
 Frame = -2

Query: 586 RHIYGHSGKNIEIFADDSSLAVNPSYISSWLNLLSQTPRVAPFLTNNDPFILALKKELGD 407
           RHIY H GKNI+IFAD+SSLAVNPSYI SWL+LLSQTPRVAPFL+ NDPF++ALKKEL D
Sbjct: 420 RHIYDHQGKNIKIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFLSKNDPFVMALKKELED 479

Query: 406 H 404
           H
Sbjct: 480 H 480


>ref|XP_003540807.1| PREDICTED: nicalin-like [Glycine max]
          Length = 552

 Score =  109 bits (272), Expect(2) = 6e-48
 Identities = 56/84 (66%), Positives = 63/84 (75%)
 Frame = -3

Query: 345 ELGDHTAEVNVQQDVLDGIFTFYDSTTAKLTIYQXXXXXXXXXXXXXVGSYLIILFSGLV 166
           EL DHT EVN+ +DVLDG+FTFYDST AKL IYQ             +GSYLI+LFS LV
Sbjct: 469 ELEDHTDEVNLHRDVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLV 528

Query: 165 ITTRGVDDLIGIFRRPPSRKQKTA 94
           ITTRG+DDLI +FRRPPSRK KTA
Sbjct: 529 ITTRGLDDLISLFRRPPSRKVKTA 552



 Score =  108 bits (271), Expect(2) = 6e-48
 Identities = 48/62 (77%), Positives = 57/62 (91%)
 Frame = -2

Query: 586 RHIYGHSGKNIEIFADDSSLAVNPSYISSWLNLLSQTPRVAPFLTNNDPFILALKKELGD 407
           RHIYGH GKNI+IFAD+S+LAVNPSY+ SWL++LSQTPRVAPFL+  DPF++ALKKEL D
Sbjct: 413 RHIYGHQGKNIQIFADNSNLAVNPSYVQSWLDVLSQTPRVAPFLSKGDPFVMALKKELED 472

Query: 406 HT 401
           HT
Sbjct: 473 HT 474


>ref|XP_003538104.1| PREDICTED: nicalin-1-like [Glycine max]
          Length = 562

 Score =  107 bits (267), Expect(2) = 2e-46
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -2

Query: 586 RHIYGHSGKNIEIFADDSSLAVNPSYISSWLNLLSQTPRVAPFLTNNDPFILALKKELGD 407
           RHIYGH GKNI+IFAD+S+LAVNPSY+ SWL++LSQTPRVAPF + +DPF++ALKKEL D
Sbjct: 423 RHIYGHQGKNIQIFADNSNLAVNPSYVRSWLDVLSQTPRVAPFFSKSDPFVMALKKELED 482

Query: 406 HT 401
           HT
Sbjct: 483 HT 484



 Score =  105 bits (263), Expect(2) = 2e-46
 Identities = 54/84 (64%), Positives = 62/84 (73%)
 Frame = -3

Query: 345 ELGDHTAEVNVQQDVLDGIFTFYDSTTAKLTIYQXXXXXXXXXXXXXVGSYLIILFSGLV 166
           EL DHT +VN+ +DVLDGI TFYDST+ KL IYQ             +GSYLI+LFS LV
Sbjct: 479 ELEDHTDDVNLHRDVLDGIVTFYDSTSTKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLV 538

Query: 165 ITTRGVDDLIGIFRRPPSRKQKTA 94
           ITTRG+DDLI +FRRPPSRK KTA
Sbjct: 539 ITTRGLDDLISLFRRPPSRKVKTA 562


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