BLASTX nr result

ID: Coptis25_contig00019241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019241
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinest...   331   1e-88
emb|CBI39447.3| unnamed protein product [Vitis vinifera]              331   1e-88
ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana] gi|753...   318   1e-84
ref|XP_002320448.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
ref|XP_002878254.1| pectinesterase family protein [Arabidopsis l...   317   2e-84

>ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinesterase inhibitor 35-like
            [Vitis vinifera]
          Length = 553

 Score =  331 bits (849), Expect = 1e-88
 Identities = 163/231 (70%), Positives = 186/231 (80%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3    STTRRSASFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYT 182
            S+T  SA+ G  GDGFIARDI+  N AGP KGQAVAL V +D+SV +RCSIIGYQDTLYT
Sbjct: 323  SSTYDSATVGVMGDGFIARDITIENDAGPGKGQAVALRVGSDRSVVFRCSIIGYQDTLYT 382

Query: 183  LSNRQFYRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGIS 362
            LS RQFYRETDIYGTVDFIFGNSAVVFQSCN+   +R S    F+TAQGR DPNQNTGIS
Sbjct: 383  LSKRQFYRETDIYGTVDFIFGNSAVVFQSCNL--NARKSSNNNFVTAQGREDPNQNTGIS 440

Query: 363  IHKCRIAGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMN 530
            IH C+I   G  TYLGRPWKKYSRTV MQS+LDG I P+GW+PW+G   +ST++YGEYMN
Sbjct: 441  IHNCKITTEGSTTYLGRPWKKYSRTVIMQSYLDGSIPPSGWYPWSGSFALSTLFYGEYMN 500

Query: 531  SGPGASTSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 683
            +GPGASTSGRVKW G    +T + A EFTVG  ISGN+WLPSTG+ F+SGL
Sbjct: 501  AGPGASTSGRVKWGGYQGELTASVAQEFTVGEFISGNAWLPSTGVSFDSGL 551


>emb|CBI39447.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  331 bits (849), Expect = 1e-88
 Identities = 163/231 (70%), Positives = 186/231 (80%), Gaps = 4/231 (1%)
 Frame = +3

Query: 3   STTRRSASFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYT 182
           S+T  SA+ G  GDGFIARDI+  N AGP KGQAVAL V +D+SV +RCSIIGYQDTLYT
Sbjct: 202 SSTYDSATVGVMGDGFIARDITIENDAGPGKGQAVALRVGSDRSVVFRCSIIGYQDTLYT 261

Query: 183 LSNRQFYRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGIS 362
           LS RQFYRETDIYGTVDFIFGNSAVVFQSCN+   +R S    F+TAQGR DPNQNTGIS
Sbjct: 262 LSKRQFYRETDIYGTVDFIFGNSAVVFQSCNL--NARKSSNNNFVTAQGREDPNQNTGIS 319

Query: 363 IHKCRIAGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMN 530
           IH C+I   G  TYLGRPWKKYSRTV MQS+LDG I P+GW+PW+G   +ST++YGEYMN
Sbjct: 320 IHNCKITTEGSTTYLGRPWKKYSRTVIMQSYLDGSIPPSGWYPWSGSFALSTLFYGEYMN 379

Query: 531 SGPGASTSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 683
           +GPGASTSGRVKW G    +T + A EFTVG  ISGN+WLPSTG+ F+SGL
Sbjct: 380 AGPGASTSGRVKWGGYQGELTASVAQEFTVGEFISGNAWLPSTGVSFDSGL 430


>ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana]
           gi|75311708|sp|Q9LYT5.1|PME35_ARATH RecName:
           Full=Probable pectinesterase/pectinesterase inhibitor
           35; Includes: RecName: Full=Pectinesterase inhibitor 35;
           AltName: Full=Pectin methylesterase inhibitor 35;
           Includes: RecName: Full=Pectinesterase 35; Short=PE 35;
           AltName: Full=Pectin methylesterase 35; Short=AtPME35;
           Flags: Precursor gi|7529744|emb|CAB86929.1|
           pectinesterase precursor-like protein [Arabidopsis
           thaliana] gi|16974625|gb|AAL31215.1| AT3g59010/F17J16_60
           [Arabidopsis thaliana] gi|24111417|gb|AAN46858.1|
           At3g59010/F17J16_60 [Arabidopsis thaliana]
           gi|332646339|gb|AEE79860.1| pectinesterase 35
           [Arabidopsis thaliana]
          Length = 529

 Score =  318 bits (814), Expect = 1e-84
 Identities = 156/229 (68%), Positives = 187/229 (81%), Gaps = 4/229 (1%)
 Frame = +3

Query: 9   TRRSASFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLS 188
           T +SA+  A GDGFIARDI+FVN+AGP+  QAVAL V +D+SV YRCSI GYQD+LYTLS
Sbjct: 302 TYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLS 361

Query: 189 NRQFYRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIH 368
            RQFYRETDI GTVDFIFGNSAVVFQSCN++ R +GS  + ++TAQGR+DPNQNTGISIH
Sbjct: 362 KRQFYRETDITGTVDFIFGNSAVVFQSCNLVSR-KGSSDQNYVTAQGRSDPNQNTGISIH 420

Query: 369 KCRIAGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWN---GMSTIYYGEYMNSG 536
            CRI G+   TYLGRPWK+YSRTV MQSF+DG I+P+GW PW+    + T+YYGE+ NSG
Sbjct: 421 NCRITGS-TKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSG 479

Query: 537 PGASTSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 683
           PG+S SGRV W+G HP++T  EA  FTV   I GNSWLPSTG++F+SGL
Sbjct: 480 PGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528


>ref|XP_002320448.1| predicted protein [Populus trichocarpa] gi|222861221|gb|EEE98763.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  317 bits (813), Expect = 2e-84
 Identities = 158/220 (71%), Positives = 179/220 (81%), Gaps = 4/220 (1%)
 Frame = +3

Query: 39  GDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSNRQFYRETDI 218
           GDGFIA+DI+FVN+AGPSK QAVAL V +D++V +RCSI GYQDTLYTLS RQFYRETDI
Sbjct: 2   GDGFIAKDITFVNSAGPSKHQAVALRVGSDRAVIFRCSIDGYQDTLYTLSKRQFYRETDI 61

Query: 219 YGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHKCRIAGTGGN 398
           YGTVDFIFGNSAVVFQ+CNI  R+ G+  K F+TAQGRT P+QNTGISI  C+I      
Sbjct: 62  YGTVDFIFGNSAVVFQNCNIFARNPGTGQKNFVTAQGRTSPDQNTGISIQNCQIEAQ-SV 120

Query: 399 TYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMNSGPGASTSGRVK 566
           TYLGRPWK+YSRTV MQS LDG I+PAGWFPW G    S+IYYGEY NSGPG+STSGRV 
Sbjct: 121 TYLGRPWKQYSRTVIMQSSLDGSIDPAGWFPWAGGSSPSSIYYGEYSNSGPGSSTSGRVN 180

Query: 567 WSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGLG 686
           W G H S+T  EA +FTVGS ISGN WLP TG+ F+SGLG
Sbjct: 181 WPGYHSSLTSVEAQKFTVGSFISGNVWLPPTGVAFDSGLG 220


>ref|XP_002878254.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324092|gb|EFH54513.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  317 bits (812), Expect = 2e-84
 Identities = 156/229 (68%), Positives = 187/229 (81%), Gaps = 4/229 (1%)
 Frame = +3

Query: 9   TRRSASFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLS 188
           T +SA+  A GDGFIARDI+FVN+AGP+  QAVAL V +D+SV YRCSI GYQD+LYTLS
Sbjct: 298 TYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLS 357

Query: 189 NRQFYRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIH 368
            RQFYRETDI GTVDFIFGNSAVVFQSCN++ R +GS  + ++TAQGR+DPNQNTGISIH
Sbjct: 358 KRQFYRETDITGTVDFIFGNSAVVFQSCNLVSR-KGSSDENYVTAQGRSDPNQNTGISIH 416

Query: 369 KCRIAGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWN---GMSTIYYGEYMNSG 536
            CRI G+   TYLGRPWK+YSRTV MQSF+DG I+P+GW PW+    + T+YYGE+ NSG
Sbjct: 417 NCRITGS-TKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSSFALKTLYYGEFGNSG 475

Query: 537 PGASTSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 683
           PG+S SGRV W+G HP++T  EA  FTV   I GNSWLPSTG++F+SGL
Sbjct: 476 PGSSVSGRVGWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 524


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