BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019212
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   241   5e-62
ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [...   241   8e-62
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [...   241   8e-62
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   236   2e-60
ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA...   236   3e-60

>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 443

 Score =  241 bits (616), Expect = 5e-62
 Identities = 116/170 (68%), Positives = 140/170 (82%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1   VLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLVGATQAGSL 180
           V+ISAK+EP SS PPAVDGLLR+H R+++GLE D + A S   G +S++LLV A+QAGSL
Sbjct: 91  VMISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSL 150

Query: 181 IGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAMELIASHLRK 360
           IGK G T+KSIQEASNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+ELIASHLRK
Sbjct: 151 IGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRK 210

Query: 361 FLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWGP-QGFPHNAGGGPGFGP 507
           FLVDR VI +FEM+MQ  +P    +MPPHQSWGP QG P N GGGPGFGP
Sbjct: 211 FLVDRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGP 260


>ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
          Length = 453

 Score =  241 bits (614), Expect = 8e-62
 Identities = 120/172 (69%), Positives = 145/172 (84%), Gaps = 3/172 (1%)
 Frame = +1

Query: 1   VLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLVGATQAGSL 180
           V++SAKDEP+S+ PPAVDGLLRVH R+V+GLE D + A  N+G  +S+RLLV A+QAGSL
Sbjct: 132 VMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAP-NAGSKVSTRLLVAASQAGSL 190

Query: 181 IGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAMELIASHLRK 360
           IGK G T+KSIQE SNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+ELIASHLRK
Sbjct: 191 IGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 250

Query: 361 FLVDRSVIGLFEMHMQNLHPQMDHNM--PPHQSWG-PQGFPHNAGGGPGFGP 507
           FLVDRS+I +FEM+MQ  +PQMD +M  PPHQ WG PQG P NAGGGPGFGP
Sbjct: 251 FLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGP 302


>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
          Length = 483

 Score =  241 bits (614), Expect = 8e-62
 Identities = 120/172 (69%), Positives = 145/172 (84%), Gaps = 3/172 (1%)
 Frame = +1

Query: 1   VLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLVGATQAGSL 180
           V++SAKDEP+S+ PPAVDGLLRVH R+V+GLE D + A  N+G  +S+RLLV A+QAGSL
Sbjct: 132 VMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAP-NAGSKVSTRLLVAASQAGSL 190

Query: 181 IGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAMELIASHLRK 360
           IGK G T+KSIQE SNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+ELIASHLRK
Sbjct: 191 IGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 250

Query: 361 FLVDRSVIGLFEMHMQNLHPQMDHNM--PPHQSWG-PQGFPHNAGGGPGFGP 507
           FLVDRS+I +FEM+MQ  +PQMD +M  PPHQ WG PQG P NAGGGPGFGP
Sbjct: 251 FLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGP 302


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  236 bits (603), Expect = 2e-60
 Identities = 114/169 (67%), Positives = 143/169 (84%), Gaps = 1/169 (0%)
 Frame = +1

Query: 1   VLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLVGATQAGSL 180
           V++SAK+EP+S+ PPA+DGLLRVH R+V+GL+ D S A+S +G  +S+RLLV A+QAGSL
Sbjct: 199 VMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSL 258

Query: 181 IGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAMELIASHLRK 360
           IGK G T+KSIQEAS+C++RVLG +DLP+FAL+DDR+VEV G+ +GV  A+ELIASHLRK
Sbjct: 259 IGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRK 318

Query: 361 FLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWG-PQGFPHNAGGGPGFG 504
           FLVDRS+I LFEMHMQ  +P    +MPPHQSWG PQG P NAGGGPG+G
Sbjct: 319 FLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYG 367


>ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
           [Glycine max]
          Length = 446

 Score =  236 bits (601), Expect = 3e-60
 Identities = 115/170 (67%), Positives = 138/170 (81%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1   VLISAKDEPESSCPPAVDGLLRVHNRVVEGLEPDLSQATSNSGGTISSRLLVGATQAGSL 180
           V+ISAK+EP SS PPAVDGLLRVH R+++GLE D + A S   G +S++LLV A+QAGSL
Sbjct: 94  VMISAKEEPGSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSL 153

Query: 181 IGKLGSTIKSIQEASNCIIRVLGQDDLPLFALEDDRIVEVQGEPSGVQTAMELIASHLRK 360
           IGK G T+KSIQEASNCI+RVLG +DLP+FAL+DDR+VEV G+P+GV  A+ELIASHLRK
Sbjct: 154 IGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRK 213

Query: 361 FLVDRSVIGLFEMHMQNLHPQMDHNMPPHQSWG-PQGFPHNAGGGPGFGP 507
           FLVDR VI +FEM+MQ  +     +MPPHQSWG PQG P N GGG GFGP
Sbjct: 214 FLVDRGVIPIFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGP 263