BLASTX nr result

ID: Coptis25_contig00019209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019209
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm...   295   1e-77
ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...   295   2e-77
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   295   2e-77
ref|XP_003602715.1| Protein SUPPRESSOR OF GENE SILENCING-like pr...   275   1e-71

>ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|222862585|gb|EEF00092.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  301 bits (772), Expect = 2e-79
 Identities = 161/347 (46%), Positives = 205/347 (59%), Gaps = 4/347 (1%)
 Frame = -3

Query: 1030 RGVGKXXXXXXXXXXXSKGKSVLSQYGDSFGDSGATNASCKVDQLSHDMADISLGS-NDD 854
            RG GK           SKGK+V    G +            V+QLS  +ADI L S  DD
Sbjct: 4    RGGGKPFGSGANTSLSSKGKNVAEASGPA------------VEQLSQGVADIGLDSVQDD 51

Query: 853  GNWEKFSKKSKNQGGGFV-KQWGSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPAGARPST 677
            G WE  +KKSKN+ G    K WGSQ +N  AWG+P+V+QKLGM+ N G+G+ P  A  + 
Sbjct: 52   GEWEVIAKKSKNRAGSSAAKPWGSQTTNNKAWGNPDVIQKLGMRNNGGSGRNPGNAWSTQ 111

Query: 676  IADYNRNYGRGNVMPHPYNRSLEN--MAPPGVMQPPLQHGWQQGARACFPAAXXXXXXXX 503
              D     GRG   P  +NR +++   AP  V++PPL+HGW   ARA   A         
Sbjct: 112  PVDPRGPTGRGAARPQTFNRGMQSNYAAPQPVIRPPLEHGWSWQARAGATALRSSEDQKN 171

Query: 502  XXXXXXXXXGHQHEXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKSHETRKKHKWFMTFFE 323
                        ++                           S +SHETRKK +WF  FF+
Sbjct: 172  EENDEVKKENDDYDDKDDEDDGDSLDDTDDELLSEDFDSDTSQQSHETRKKSRWFKKFFD 231

Query: 322  TLDKLTIEQLNEPSRQWHCPACRNGPGAIEWYKGLLPLMAHAKTKGSTRVRVHRELAELL 143
            +LD L+IE++NEP+RQWHCPAC+ GPGAI+WY+GL PL+ HAKTKGS RV++HRELAELL
Sbjct: 232  SLDSLSIEEVNEPARQWHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELL 291

Query: 142  DEELIQRGTSVIPSGEAFGKWEGLRETVSDREIVWPPMVVVMNTQLE 2
            DEEL +RGTSVIP+GE FGKW+GL++   D EIVWPPMV+VMNT+LE
Sbjct: 292  DEELSRRGTSVIPAGEVFGKWKGLKDDEKDHEIVWPPMVIVMNTRLE 338


>ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis]
           gi|223542994|gb|EEF44530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score =  295 bits (756), Expect = 1e-77
 Identities = 158/327 (48%), Positives = 198/327 (60%), Gaps = 4/327 (1%)
 Frame = -3

Query: 970 SVLSQYGDSFGDSGATNASCKVDQLSHDMADISL-GSNDDGNWEKFSKKSKNQGGGFV-K 797
           +V      S G + +  +S K++QLS  +ADI+L  + DDG WE  ++K+KN+ G    K
Sbjct: 12  AVSGNNSSSKGKNSSHVSSPKLEQLSQSVADINLDATEDDGQWEVIARKTKNRAGSSAAK 71

Query: 796 QWGSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPAGARPSTIADYNRNYGRGNVMPHPYNR 617
            WGSQ SN  AW H + VQKLGM+ N G+G+     RP+         GRGN  P   N 
Sbjct: 72  PWGSQNSNTKAWEHQDTVQKLGMRSNGGSGRMSGNTRPTQAT------GRGNTRPQSSNW 125

Query: 616 SLEN--MAPPGVMQPPLQHGWQQGARACFPAAXXXXXXXXXXXXXXXXXGHQHEXXXXXX 443
            +EN  +AP   + PPL+HGW   +R  F AA                     E      
Sbjct: 126 GMENNYVAPQPTIPPPLEHGWNWQSR--FGAAAPKGSVDDQRKDEDFV---DQENDADEE 180

Query: 442 XXXXXXXXXXXXXXXXXXXXXSTKSHETRKKHKWFMTFFETLDKLTIEQLNEPSRQWHCP 263
                                S KSHETRKK +WF  FF++LD LT E++NEP+RQWHCP
Sbjct: 181 EDEAIDDTDDEVLSEDFDSDASQKSHETRKKSRWFKKFFDSLDSLTAEEINEPARQWHCP 240

Query: 262 ACRNGPGAIEWYKGLLPLMAHAKTKGSTRVRVHRELAELLDEELIQRGTSVIPSGEAFGK 83
           AC+ GPGAI+WY+GL PLM HAKTKGS RVR+HRELAELLDEEL +RGTSVIP+GE FGK
Sbjct: 241 ACQGGPGAIDWYRGLQPLMTHAKTKGSNRVRLHRELAELLDEELHRRGTSVIPAGEVFGK 300

Query: 82  WEGLRETVSDREIVWPPMVVVMNTQLE 2
           W+GL+E  SDREIVWPPMV++MNT+LE
Sbjct: 301 WKGLKEEESDREIVWPPMVIIMNTRLE 327


>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
            vinifera]
          Length = 718

 Score =  295 bits (754), Expect = 2e-77
 Identities = 157/331 (47%), Positives = 196/331 (59%), Gaps = 20/331 (6%)
 Frame = -3

Query: 934  SGATNASCK-----------VDQLSHDMADISLGSNDDGNWEKFSKKSKNQGGGFV-KQW 791
            +GA+NAS K           V+ L+  +ADISL S  DG WE +S+KSKN+ G    K W
Sbjct: 84   AGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKNRAGSSAAKSW 143

Query: 790  GSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPAGARPSTIADYNRNYGRGNVMPHPYNRSL 611
              Q S+  AWG P+  QKLGM+ N G+GKAPA +  +  AD  +  GRGNV P   NR L
Sbjct: 144  APQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSWAAQTADSRKPAGRGNVRPQSINRGL 203

Query: 610  EN--MAPPGVMQPPLQHGWQQGARACFPAAXXXXXXXXXXXXXXXXXGHQHEXXXXXXXX 437
            E   M P  V+ PPL+HGW+   R   P +                     E        
Sbjct: 204  EGSYMGPQPVIPPPLEHGWKWNNR---PGSIKSEDVRGKDENNFNSYSADIEDDKEEDID 260

Query: 436  XXXXXXXXXXXXXXXXXXXSTKSHETRKKH------KWFMTFFETLDKLTIEQLNEPSRQ 275
                                  S  ++K H      KWF +FFE LD LTIE++NEP+RQ
Sbjct: 261  DNDDDVDVADDSDDELLSDDFDSDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQ 320

Query: 274  WHCPACRNGPGAIEWYKGLLPLMAHAKTKGSTRVRVHRELAELLDEELIQRGTSVIPSGE 95
            WHCPAC+ GPGAI+WY+GL PL+ HAKTKGS RV++HRELAELLDEEL +RGTSV+P+GE
Sbjct: 321  WHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELLDEELYRRGTSVVPAGE 380

Query: 94   AFGKWEGLRETVSDREIVWPPMVVVMNTQLE 2
            AFGKW+GL E+V D EIVWPPMV++MNT+LE
Sbjct: 381  AFGKWKGLYESVKDHEIVWPPMVIIMNTRLE 411


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  295 bits (754), Expect = 2e-77
 Identities = 157/331 (47%), Positives = 196/331 (59%), Gaps = 20/331 (6%)
 Frame = -3

Query: 934  SGATNASCK-----------VDQLSHDMADISLGSNDDGNWEKFSKKSKNQGGGFV-KQW 791
            +GA+NAS K           V+ L+  +ADISL S  DG WE +S+KSKN+ G    K W
Sbjct: 321  AGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKNRAGSSAAKSW 380

Query: 790  GSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPAGARPSTIADYNRNYGRGNVMPHPYNRSL 611
              Q S+  AWG P+  QKLGM+ N G+GKAPA +  +  AD  +  GRGNV P   NR L
Sbjct: 381  APQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSWAAQTADSRKPAGRGNVRPQSINRGL 440

Query: 610  EN--MAPPGVMQPPLQHGWQQGARACFPAAXXXXXXXXXXXXXXXXXGHQHEXXXXXXXX 437
            E   M P  V+ PPL+HGW+   R   P +                     E        
Sbjct: 441  EGSYMGPQPVIPPPLEHGWKWNNR---PGSIKSEDVRGKDENNFNSYSADIEDDKEEDID 497

Query: 436  XXXXXXXXXXXXXXXXXXXSTKSHETRKKH------KWFMTFFETLDKLTIEQLNEPSRQ 275
                                  S  ++K H      KWF +FFE LD LTIE++NEP+RQ
Sbjct: 498  DNDDDVDVADDSDDELLSDDFDSDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQ 557

Query: 274  WHCPACRNGPGAIEWYKGLLPLMAHAKTKGSTRVRVHRELAELLDEELIQRGTSVIPSGE 95
            WHCPAC+ GPGAI+WY+GL PL+ HAKTKGS RV++HRELAELLDEEL +RGTSV+P+GE
Sbjct: 558  WHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELLDEELYRRGTSVVPAGE 617

Query: 94   AFGKWEGLRETVSDREIVWPPMVVVMNTQLE 2
            AFGKW+GL E+V D EIVWPPMV++MNT+LE
Sbjct: 618  AFGKWKGLYESVKDHEIVWPPMVIIMNTRLE 648


>ref|XP_003602715.1| Protein SUPPRESSOR OF GENE SILENCING-like protein [Medicago
           truncatula] gi|355491763|gb|AES72966.1| Protein
           SUPPRESSOR OF GENE SILENCING-like protein [Medicago
           truncatula]
          Length = 644

 Score =  275 bits (704), Expect = 1e-71
 Identities = 150/316 (47%), Positives = 183/316 (57%), Gaps = 6/316 (1%)
 Frame = -3

Query: 931 GATNASCKVDQLSHDMADISLGSN-DDGNWEKFSKKSKNQGGGF--VKQWGSQC--SNPN 767
           G +    K +QL+  +AD++LGS  DDG WE +SKKSKN+GGG    KQ G     SNP 
Sbjct: 24  GVSQFDPKTEQLAQGIADVNLGSGQDDGPWETYSKKSKNRGGGSGAAKQRGPPAHGSNPR 83

Query: 766 AWGHPNVVQKLGMKGNSGTGKAPAGARPSTIADYNRNYGRGNVMPHPYNRSLE-NMAPPG 590
           AWG+ +V QK G+  NSG G+A      +  A Y R  GRGN  P P       N+    
Sbjct: 84  AWGNADVAQKQGVWNNSGAGRAAGNPWQTPNAGYMRPAGRGNGRPQPATGGYGYNVTSNP 143

Query: 589 VMQPPLQHGWQQGARACFPAAXXXXXXXXXXXXXXXXXGHQHEXXXXXXXXXXXXXXXXX 410
           ++ PPLQ GW   +                          + E                 
Sbjct: 144 IIPPPLQGGWNWKSTHARNEIVPEEFEQKNDGEEDDDDEEEEEDDCDDLEDTDDDLMSDE 203

Query: 409 XXXXXXXXXXSTKSHETRKKHKWFMTFFETLDKLTIEQLNEPSRQWHCPACRNGPGAIEW 230
                       KSHETRKK KWF  FF+ LD LTI+Q+NEP RQWHCPAC+ GPGAI+W
Sbjct: 204 YDSDASQ-----KSHETRKKSKWFKKFFQNLDNLTIDQINEPERQWHCPACQGGPGAIDW 258

Query: 229 YKGLLPLMAHAKTKGSTRVRVHRELAELLDEELIQRGTSVIPSGEAFGKWEGLRETVSDR 50
           Y+GL PLM HAKTKGS RV+VHRELA LLDEEL +RGT+V+P+GEAFGKW+GL+E   D 
Sbjct: 259 YRGLQPLMNHAKTKGSKRVKVHRELAVLLDEELRRRGTTVVPAGEAFGKWKGLKEEEKDH 318

Query: 49  EIVWPPMVVVMNTQLE 2
           EIVWPPMV++ NTQLE
Sbjct: 319 EIVWPPMVMIQNTQLE 334


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