BLASTX nr result

ID: Coptis25_contig00019206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019206
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280023.1| PREDICTED: mitochondrial substrate carrier f...   235   6e-84
ref|XP_002329828.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-83
ref|XP_002509449.1| Mitochondrial carnitine/acylcarnitine carrie...   223   8e-81
ref|XP_004146612.1| PREDICTED: mitochondrial substrate carrier f...   208   3e-77
ref|XP_003528461.1| PREDICTED: mitochondrial substrate carrier f...   211   3e-73

>ref|XP_002280023.1| PREDICTED: mitochondrial substrate carrier family protein S [Vitis
           vinifera] gi|297740410|emb|CBI30592.3| unnamed protein
           product [Vitis vinifera]
          Length = 303

 Score =  235 bits (600), Expect(2) = 6e-84
 Identities = 121/176 (68%), Positives = 135/176 (76%)
 Frame = -2

Query: 940 KMQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTILRESIGNAVFFSTYEY 761
           +MQ+QGTDSLV K +RYSSPLDCALKT+K EGVTG+FRGG+TT+LRES GNAVFFS YEY
Sbjct: 132 RMQIQGTDSLVPKSSRYSSPLDCALKTMKTEGVTGIFRGGLTTLLRESFGNAVFFSVYEY 191

Query: 760 IRHYMQLQRNPALSGSNDQPNALIDXXXXXXXXXXXXVAFWSAVLPLDVAKTIIQTVPDT 581
           +R+YM LQ   A S  ND    LID            VAFWSAVLPLDVAKTIIQT  D 
Sbjct: 192 VRYYMHLQLKAASSDHND----LIDVGIGIVTGGLGGVAFWSAVLPLDVAKTIIQTASDK 247

Query: 580 SSSRNPLLTLQSIYKTTGFRGCYAGLGPTLVRAFPANAAAIVTWELAAKVLGIKRE 413
           SS++NP   L SIY+  G RGCY GLGPT+ RAFPANAAAIVTWELA K+LGIKRE
Sbjct: 248 SSTKNPFRILNSIYRRAGLRGCYTGLGPTIARAFPANAAAIVTWELAIKLLGIKRE 303



 Score =  103 bits (256), Expect(2) = 6e-84
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = -1

Query: 1145 VRGLYRGATSSFFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISF 966
            V+GLYRGATSSF GMAFESS+LFG+YS+TKQ +Q     + PQ QVIIPSAA+ GAIISF
Sbjct: 62   VKGLYRGATSSFLGMAFESSLLFGIYSRTKQKMQEGLQNTRPQPQVIIPSAAYSGAIISF 121

Query: 965  ILCPSELVK 939
            +LCPSEL+K
Sbjct: 122  VLCPSELLK 130


>ref|XP_002329828.1| predicted protein [Populus trichocarpa] gi|222870890|gb|EEF08021.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  228 bits (581), Expect(2) = 3e-83
 Identities = 116/174 (66%), Positives = 133/174 (76%)
 Frame = -2

Query: 940 KMQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTILRESIGNAVFFSTYEY 761
           +MQ+QGTDSLV K +RYSSPLDCAL+T+K+EGVTG+FRGG TT+LRESIG+AVFFS YEY
Sbjct: 132 RMQIQGTDSLVPKFSRYSSPLDCALQTMKNEGVTGIFRGGFTTLLRESIGSAVFFSVYEY 191

Query: 760 IRHYMQLQRNPALSGSNDQPNALIDXXXXXXXXXXXXVAFWSAVLPLDVAKTIIQTVPDT 581
           +R+YM LQ  P LS  ++    L D            VAFWSAVLPLDVAKTIIQT PD 
Sbjct: 192 VRYYMHLQLKPTLSDHSN----LTDMGIGIVTGGLSGVAFWSAVLPLDVAKTIIQTAPDK 247

Query: 580 SSSRNPLLTLQSIYKTTGFRGCYAGLGPTLVRAFPANAAAIVTWELAAKVLGIK 419
           SS+RNP   L SIY   G +GCY G GPT+VRAFPANAAAIVTWELA K+LG K
Sbjct: 248 SSTRNPFAVLNSIYSRAGLKGCYTGFGPTIVRAFPANAAAIVTWELAMKMLGDK 301



 Score =  108 bits (269), Expect(2) = 3e-83
 Identities = 53/69 (76%), Positives = 61/69 (88%)
 Frame = -1

Query: 1145 VRGLYRGATSSFFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISF 966
            V+GLYRGATSSF G+AFESS+LFG+YSQTKQ+LQG      P+ QVIIPSAA+GGAIISF
Sbjct: 62   VKGLYRGATSSFVGVAFESSLLFGIYSQTKQSLQGGGQSDVPRPQVIIPSAAYGGAIISF 121

Query: 965  ILCPSELVK 939
            +LCPSELVK
Sbjct: 122  VLCPSELVK 130


>ref|XP_002509449.1| Mitochondrial carnitine/acylcarnitine carrier protein, putative
           [Ricinus communis] gi|223549348|gb|EEF50836.1|
           Mitochondrial carnitine/acylcarnitine carrier protein,
           putative [Ricinus communis]
          Length = 269

 Score =  223 bits (567), Expect(2) = 8e-81
 Identities = 113/176 (64%), Positives = 132/176 (75%)
 Frame = -2

Query: 940 KMQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTILRESIGNAVFFSTYEY 761
           +MQVQGTD LV K +RYS PLDCA +T+K +GV+G+FRGG+ T+LRES GNAVFFS YEY
Sbjct: 98  RMQVQGTDILVPKFSRYSGPLDCAHQTVKHDGVSGIFRGGLATLLRESFGNAVFFSVYEY 157

Query: 760 IRHYMQLQRNPALSGSNDQPNALIDXXXXXXXXXXXXVAFWSAVLPLDVAKTIIQTVPDT 581
           +R+YM LQ    L  S+   + LID            VAFWSAVLPLDVAKT+IQT PD 
Sbjct: 158 VRYYMHLQ----LKDSSSNHSHLIDMGIGIMSGGLGGVAFWSAVLPLDVAKTVIQTAPDK 213

Query: 580 SSSRNPLLTLQSIYKTTGFRGCYAGLGPTLVRAFPANAAAIVTWELAAKVLGIKRE 413
           S +RNP   L SIY+  G RGCYAGLGPT+VRAFPANAAAIVTWELA KVLGI+ +
Sbjct: 214 SFTRNPFRVLNSIYRRAGLRGCYAGLGPTIVRAFPANAAAIVTWELAMKVLGIRHD 269



 Score =  105 bits (262), Expect(2) = 8e-81
 Identities = 52/69 (75%), Positives = 60/69 (86%)
 Frame = -1

Query: 1145 VRGLYRGATSSFFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISF 966
            V+GLYRGATSSF GMAFESS+LFG+YSQ KQ+LQG  +   P  QVIIPSAA+GGAIISF
Sbjct: 28   VKGLYRGATSSFVGMAFESSLLFGVYSQRKQSLQGGLHSDVPIPQVIIPSAAYGGAIISF 87

Query: 965  ILCPSELVK 939
            +LCPSEL+K
Sbjct: 88   VLCPSELIK 96


>ref|XP_004146612.1| PREDICTED: mitochondrial substrate carrier family protein S-like
           [Cucumis sativus] gi|449511666|ref|XP_004164021.1|
           PREDICTED: mitochondrial substrate carrier family
           protein S-like [Cucumis sativus]
          Length = 305

 Score =  208 bits (529), Expect(2) = 3e-77
 Identities = 110/176 (62%), Positives = 128/176 (72%)
 Frame = -2

Query: 940 KMQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTILRESIGNAVFFSTYEY 761
           +MQVQGTDSLV   +RY  P+DCALKTIK EG TG+FRGG TT LRESIGNAVFFS YE 
Sbjct: 132 RMQVQGTDSLVPVSSRYRGPVDCALKTIKTEGATGIFRGGFTTFLRESIGNAVFFSVYEN 191

Query: 760 IRHYMQLQRNPALSGSNDQPNALIDXXXXXXXXXXXXVAFWSAVLPLDVAKTIIQTVPDT 581
           +R+YM  Q + + S SN   N L+D            V FW AVLPLDVAKT+IQT  D 
Sbjct: 192 VRYYMHSQLH-STSNSNVHGN-LMDMGIGILTGGLGGVGFWLAVLPLDVAKTVIQTSTDK 249

Query: 580 SSSRNPLLTLQSIYKTTGFRGCYAGLGPTLVRAFPANAAAIVTWELAAKVLGIKRE 413
           + +RNP L L+SIY+  G +GCY GLGPT++RAFPANAAAIV WELA KVLGI R+
Sbjct: 250 NVTRNPFLVLRSIYQNAGIKGCYTGLGPTVLRAFPANAAAIVCWELAMKVLGIPRD 305



 Score =  108 bits (269), Expect(2) = 3e-77
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = -1

Query: 1145 VRGLYRGATSSFFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISF 966
            VRGLYRGATSSF G++FESS+LFG+YS+TKQ+LQG      P+ QV+IPSAA+GGAIISF
Sbjct: 62   VRGLYRGATSSFIGVSFESSLLFGIYSRTKQSLQGGDQNGRPRPQVVIPSAAYGGAIISF 121

Query: 965  ILCPSELVK 939
            ILCPSELVK
Sbjct: 122  ILCPSELVK 130


>ref|XP_003528461.1| PREDICTED: mitochondrial substrate carrier family protein S-like
           [Glycine max]
          Length = 305

 Score =  211 bits (538), Expect(2) = 3e-73
 Identities = 109/176 (61%), Positives = 127/176 (72%)
 Frame = -2

Query: 940 KMQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTILRESIGNAVFFSTYEY 761
           +MQ+QGTDSLV K +RY+SPLDCALKT+K EGV G+FRGG  T+LRESIGNAVFFS YEY
Sbjct: 134 RMQIQGTDSLVPKSSRYNSPLDCALKTVKTEGVKGIFRGGCATLLRESIGNAVFFSVYEY 193

Query: 760 IRHYMQLQRNPALSGSNDQPNALIDXXXXXXXXXXXXVAFWSAVLPLDVAKTIIQTVPDT 581
           +R+YM      A   S+D  N L+D            VAFW  VLPLDVAKT+IQT PD 
Sbjct: 194 VRYYMHSNIKAA---SSDYTN-LVDIGIGIVSGGLGGVAFWLTVLPLDVAKTLIQTNPDK 249

Query: 580 SSSRNPLLTLQSIYKTTGFRGCYAGLGPTLVRAFPANAAAIVTWELAAKVLGIKRE 413
           +  RNP   L SIY+  GF+GCY GLGPT+ RAFPANAA IV WELA K+LGIK +
Sbjct: 250 NCPRNPFRVLSSIYQRAGFKGCYTGLGPTVSRAFPANAATIVAWELALKMLGIKHD 305



 Score = 91.7 bits (226), Expect(2) = 3e-73
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -1

Query: 1145 VRGLYRGATSSFFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISF 966
            ++GLYRGATSSF GMA E S+ FG+YSQTK  LQG      P+ QVIIPSAA+ GAIISF
Sbjct: 64   IKGLYRGATSSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAYSGAIISF 123

Query: 965  ILCPSELVK 939
            +L P+EL+K
Sbjct: 124  VLGPTELIK 132


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