BLASTX nr result
ID: Coptis25_contig00019205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019205
(358 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521413.1| conserved hypothetical protein [Ricinus comm... 105 5e-21
emb|CAN77990.1| hypothetical protein VITISV_037732 [Vitis vinifera] 104 7e-21
ref|XP_003593479.1| Bromodomain protein [Medicago truncatula] gi... 101 6e-20
ref|XP_002305671.1| bromodomain protein [Populus trichocarpa] gi... 101 7e-20
ref|XP_003547134.1| PREDICTED: uncharacterized protein LOC100804... 100 2e-19
>ref|XP_002521413.1| conserved hypothetical protein [Ricinus communis]
gi|223539312|gb|EEF40903.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 105 bits (261), Expect = 5e-21
Identities = 50/100 (50%), Positives = 75/100 (75%)
Frame = -2
Query: 357 NLMSLLDSILMQNGSTTLFTKRTDSQRRGRYKKTIRQHMDLTTIRSRISDRLIASTRELY 178
+++ + DSI +N T+F +R DSQ+RGRYKK I QHMD+ T+RSRIS I + +E++
Sbjct: 273 DIIGIFDSIA-ENKCATVFRRRLDSQKRGRYKKMILQHMDIDTLRSRISSHSITTLKEVF 331
Query: 177 RDLLLLCSNIIVFYSKESREYRAAISFREFLTKTSWQNVR 58
RDLLLL +N +VFYSK +REY++A+ RE +TK+ Q+++
Sbjct: 332 RDLLLLANNALVFYSKTTREYKSALQLREIVTKSLQQHLK 371
>emb|CAN77990.1| hypothetical protein VITISV_037732 [Vitis vinifera]
Length = 489
Score = 104 bits (260), Expect = 7e-21
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 3/119 (2%)
Frame = -2
Query: 357 NLMSLLDSILMQNGSTTLFTKRTDSQRRGRYKKTIRQHMDLTTIRSRISDRLIASTRELY 178
+LM + SI M+N + +F R DSQRR RYKK +RQHMD TIRSRI+ LI ++REL+
Sbjct: 306 DLMGIFYSI-MENENAPVFRGRHDSQRRARYKKLVRQHMDFDTIRSRINSHLITTSRELF 364
Query: 177 RDLLLLCSNIIVFYSKESREYRAAISFREFLT---KTSWQNVRVSGTCGGSSVPPSQQP 10
RDLLLL +N +VFYSK+SRE+++A+ R+ ++ K +++ R S P Q P
Sbjct: 365 RDLLLLANNALVFYSKKSREHKSAVLLRDLVSRRLKQHYKDSRAKAAVAVLSTSPIQNP 423
>ref|XP_003593479.1| Bromodomain protein [Medicago truncatula]
gi|355482527|gb|AES63730.1| Bromodomain protein
[Medicago truncatula]
Length = 839
Score = 101 bits (252), Expect = 6e-20
Identities = 52/114 (45%), Positives = 76/114 (66%)
Frame = -2
Query: 357 NLMSLLDSILMQNGSTTLFTKRTDSQRRGRYKKTIRQHMDLTTIRSRISDRLIASTRELY 178
+++ +LDSI G++ F +R D Q+RG+YKK I++HMD TIRSRIS R I STRELY
Sbjct: 637 DMIKILDSIFETEGASA-FRRRLDGQKRGKYKKMIQKHMDFDTIRSRISSRTIESTRELY 695
Query: 177 RDLLLLCSNIIVFYSKESREYRAAISFREFLTKTSWQNVRVSGTCGGSSVPPSQ 16
RDLLLL +N +VFYSK + EY+ A+ R + K ++++ S + P++
Sbjct: 696 RDLLLLTNNALVFYSKITHEYKTALLLRGIVAKKMRESLKGSTSSSKKVTEPNE 749
>ref|XP_002305671.1| bromodomain protein [Populus trichocarpa]
gi|222848635|gb|EEE86182.1| bromodomain protein [Populus
trichocarpa]
Length = 513
Score = 101 bits (251), Expect = 7e-20
Identities = 49/96 (51%), Positives = 72/96 (75%)
Frame = -2
Query: 345 LLDSILMQNGSTTLFTKRTDSQRRGRYKKTIRQHMDLTTIRSRISDRLIASTRELYRDLL 166
+ DSI +N ++F +R DSQ+RGRYKK I QHMD+ TIRSRI+ I + +E++RDLL
Sbjct: 285 IFDSIA-ENKCASVFHRRLDSQKRGRYKKMILQHMDIDTIRSRIASGSITTAKEIFRDLL 343
Query: 165 LLCSNIIVFYSKESREYRAAISFREFLTKTSWQNVR 58
LL +N +VFYSK +REY++A+ R+ +TK+ QN++
Sbjct: 344 LLANNALVFYSKTTREYKSALLLRDIVTKSLQQNLK 379
>ref|XP_003547134.1| PREDICTED: uncharacterized protein LOC100804245 [Glycine max]
Length = 475
Score = 99.8 bits (247), Expect = 2e-19
Identities = 51/100 (51%), Positives = 71/100 (71%)
Frame = -2
Query: 357 NLMSLLDSILMQNGSTTLFTKRTDSQRRGRYKKTIRQHMDLTTIRSRISDRLIASTRELY 178
++M +LD I G++ F +R DSQ+RGRYKK I QHMD TIRSRIS + I S+ EL+
Sbjct: 272 DMMEILDFIFETKGASA-FQRRLDSQKRGRYKKMILQHMDFDTIRSRISSQTIKSSVELF 330
Query: 177 RDLLLLCSNIIVFYSKESREYRAAISFREFLTKTSWQNVR 58
RDLLLL +N +VFYSK +REY+ A+ R +TK ++++
Sbjct: 331 RDLLLLTNNALVFYSKSTREYKTALLLRGIVTKKMRESLK 370