BLASTX nr result
ID: Coptis25_contig00019204
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019204
(1084 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB62040.1| CjMDR1 [Coptis japonica] 191 6e-59
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1... 188 2e-58
emb|CAN81148.1| hypothetical protein VITISV_020814 [Vitis vinifera] 188 2e-58
ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, AB... 191 5e-58
dbj|BAM11098.1| ABC protein [Coptis japonica] 191 5e-58
>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
Length = 1289
Score = 191 bits (484), Expect(2) = 6e-59
Identities = 117/208 (56%), Positives = 141/208 (67%), Gaps = 3/208 (1%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ LLQ FYDPD GHITLDGI I+ FQ+RWLR QMGLVSQEPVLF + + G
Sbjct: 1091 ISLLQRFYDPDSGHITLDGIEIQKFQLRWLRLQMGLVSQEPVLFNETIRANIAYGKEGDA 1150
Query: 713 NRGCDIMAAAELANAHKFISGLEQVESFNYITSFLYIRRRNLVLHFLIET*KQNNARGCT 534
+I+AAAELANAHKFISGL+Q Y T + R + L + Q
Sbjct: 1151 TE-TEILAAAELANAHKFISGLQQ----GYDT---VVGERGIQL-----SGGQKQRVAIA 1197
Query: 533 CNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIAVIK 363
+A K LL DEATSALDAESERVVQ ALD+VMV+RTT+ LSTIKNAD+IAV+K
Sbjct: 1198 RAMVKAPKILLLDEATSALDAESERVVQDALDKVMVNRTTVWVAHRLSTIKNADVIAVVK 1257
Query: 362 NGIITEKGKHEELLNIENGVYANLAALH 279
NG+I EKGKH +L+N+++GVYA+L ALH
Sbjct: 1258 NGVIAEKGKHNDLINVKDGVYASLVALH 1285
Score = 64.3 bits (155), Expect(2) = 6e-59
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RKSKIDS D+SGM + ++KGEI+ R ++FKYP RPD+QI D+ L I
Sbjct: 1025 RKSKIDSSDESGMTVENVKGEIELRHISFKYPTRPDIQIFRDLSLAI 1071
Score = 133 bits (334), Expect(2) = 1e-36
Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ L++ FYDP G + +DG+N++DFQ+RW+R ++GLVSQEPVLF SS GK
Sbjct: 439 ISLIERFYDPQAGEVLIDGVNLKDFQLRWIRGKIGLVSQEPVLFA---SSIRDNIAYGKD 495
Query: 713 NRGCD-IMAAAELANAHKFISGLEQ-VESF--NYITSFLYIRRRNLVLHFLIET*KQNNA 546
+ I AA E ANA KFI L Q +++ + T +++ + + I
Sbjct: 496 GATVEEIKAATERANASKFIDKLPQGLDTLVGEHGTQLSGGQKQRIAIARAI-------- 547
Query: 545 RGCTCNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLI 375
+ + LL DEATSALDAESE +VQ ALDR+MV+RTT++ LST++NAD I
Sbjct: 548 -------LKDPRILLLDEATSALDAESEHIVQEALDRIMVNRTTVIVAHRLSTVRNADTI 600
Query: 374 AVIKNGIITEKGKHEELLNIENGVYANLAAL 282
AVI G I EKG H +LL +G Y L L
Sbjct: 601 AVIHRGKIVEKGSHLDLLLNPDGAYCQLIRL 631
Score = 47.4 bits (111), Expect(2) = 1e-36
Identities = 24/47 (51%), Positives = 29/47 (61%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RK +IDS D SG DI+G+I+ R V+F YP RPD QI L I
Sbjct: 373 RKPEIDSYDTSGHKSDDIRGDIELRDVSFTYPARPDEQIFNGFSLFI 419
>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
Length = 1294
Score = 188 bits (478), Expect(2) = 2e-58
Identities = 116/209 (55%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ LLQ FYDPD GHITLDG+ I+ Q++W R+QMGLVSQEPVLF + + G
Sbjct: 1095 ISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGLVSQEPVLFNETIRANIAYGKEGNA 1154
Query: 713 NRGCDIMAAAELANAHKFISGLEQVESFNYITSFLYIRRRNLVLHFLIET*KQNNARGCT 534
+I AAAELANAHKFISGL+Q Y T+ + R + L + Q
Sbjct: 1155 TEA-EISAAAELANAHKFISGLQQ----GYDTT---VGERGIQL-----SGGQKQRVAIA 1201
Query: 533 CNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIAVIK 363
+ K LL DEATSALDAESERVVQ ALDRVMV+RTT+V LSTIK ADLIAV+K
Sbjct: 1202 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGADLIAVVK 1261
Query: 362 NGIITEKGKHEELLNIENGVYANLAALHM 276
NG I EKGKHE L+NI++G+YA+L ALHM
Sbjct: 1262 NGAIAEKGKHETLINIKDGIYASLVALHM 1290
Score = 65.1 bits (157), Expect(2) = 2e-58
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
R+SKIDS D+SG L ++KGEI+F V+F+YP RPD+QI D+CL I
Sbjct: 1029 RESKIDSSDESGTTLENVKGEIEFHHVSFRYPTRPDIQIFRDLCLAI 1075
Score = 141 bits (355), Expect(2) = 7e-38
Identities = 95/211 (45%), Positives = 128/211 (60%), Gaps = 7/211 (3%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ L++ FYDP G + +DGIN+++FQ+RW+R ++GLVSQEPVLF SS GK
Sbjct: 439 ISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLF---TSSIRDNIAYGKD 495
Query: 713 NRGCD-IMAAAELANAHKFISGLEQ-VESF--NYITSFLYIRRRNLVLHFLIET*KQNNA 546
+ I AAAELANA KFI L Q +++ + T +++ + + I
Sbjct: 496 GATIEEIRAAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQRVAIARAI-------- 547
Query: 545 RGCTCNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLI 375
+ + LL DEATSALDAESERVVQ ALDRVM++RTTI+ LST++NAD+I
Sbjct: 548 -------LKDPRILLLDEATSALDAESERVVQEALDRVMINRTTIIVAHRLSTVRNADMI 600
Query: 374 AVIKNGIITEKGKHEELLNIENGVYANLAAL 282
AVI G I EKG H EL+ +G Y+ L L
Sbjct: 601 AVIHRGKIVEKGAHSELIKDPDGAYSLLIRL 631
Score = 43.5 bits (101), Expect(2) = 7e-38
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RK +ID+ G L DI+G+++ R V F YP RPD Q+ L I
Sbjct: 373 RKPEIDAYSSDGQKLDDIQGDVELRDVYFSYPTRPDEQVFKGFSLSI 419
>emb|CAN81148.1| hypothetical protein VITISV_020814 [Vitis vinifera]
Length = 396
Score = 188 bits (478), Expect(2) = 2e-58
Identities = 116/209 (55%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ LLQ FYDPD GHITLDG+ I+ Q++W R+QMGLVSQEPVLF + + G
Sbjct: 197 ISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGLVSQEPVLFNETIRANIAYGKEGNA 256
Query: 713 NRGCDIMAAAELANAHKFISGLEQVESFNYITSFLYIRRRNLVLHFLIET*KQNNARGCT 534
+I AAAELANAHKFISGL+Q Y T+ + R + L + Q
Sbjct: 257 TEA-EISAAAELANAHKFISGLQQ----GYDTT---VGERGIQL-----SGGQKQRVAIA 303
Query: 533 CNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIAVIK 363
+ K LL DEATSALDAESERVVQ ALDRVMV+RTT+V LSTIK ADLIAV+K
Sbjct: 304 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGADLIAVVK 363
Query: 362 NGIITEKGKHEELLNIENGVYANLAALHM 276
NG I EKGKHE L+NI++G+YA+L ALHM
Sbjct: 364 NGAIAEKGKHETLINIKDGIYASLVALHM 392
Score = 65.1 bits (157), Expect(2) = 2e-58
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
R+SKIDS D+SG L ++KGEI+F V+F+YP RPD+QI D+CL I
Sbjct: 131 RESKIDSSDESGTTLENVKGEIEFHHVSFRYPTRPDIQIFRDLCLAI 177
>ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222861715|gb|EEE99257.1|
multidrug/pheromone exporter, MDR family, ABC transporter
family [Populus trichocarpa]
Length = 1294
Score = 191 bits (486), Expect(2) = 5e-58
Identities = 117/209 (55%), Positives = 142/209 (67%), Gaps = 3/209 (1%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ LLQ FYDPD GHITLDGI+I+ Q++WLR+QMGLVSQEPVLF + + G
Sbjct: 1094 ISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKEGNA 1153
Query: 713 NRGCDIMAAAELANAHKFISGLEQVESFNYITSFLYIRRRNLVLHFLIET*KQNNARGCT 534
+I+AA+ELANAHKFISGL+Q Y T + R L + Q
Sbjct: 1154 TEA-EILAASELANAHKFISGLQQ----GYDT---VVGERGTQL-----SGGQKQRVAIA 1200
Query: 533 CNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIAVIK 363
++ K LL DEATSALDAESERVVQ ALDRVMVSRTT+V LSTIKNAD+IAV+K
Sbjct: 1201 RAMVKSPKILLLDEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVK 1260
Query: 362 NGIITEKGKHEELLNIENGVYANLAALHM 276
NG+I EKGKHE L++I++G YA+L ALHM
Sbjct: 1261 NGVIVEKGKHETLIHIKDGFYASLVALHM 1289
Score = 60.5 bits (145), Expect(2) = 5e-58
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RKSKID D+SG L ++KGEI+ R ++FKYP RPD++I D+ L I
Sbjct: 1028 RKSKIDPSDESGTTLDNVKGEIELRHISFKYPSRPDIEIFRDLSLAI 1074
Score = 138 bits (348), Expect(2) = 6e-39
Identities = 88/210 (41%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ L++ FYDP G + +DG N+++FQ++W+RE++GLVSQEPVLF + G
Sbjct: 435 ISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFASSIKDNIAYGKDGAT 494
Query: 713 NRGCDIMAAAELANAHKFISGLEQ-VESF--NYITSFLYIRRRNLVLHFLIET*KQNNAR 543
+I AA ELANA KFI L Q +++ + T +++ + + I
Sbjct: 495 TE--EIRAATELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIARAI--------- 543
Query: 542 GCTCNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIA 372
+ + LL DEATSALDAESER+VQ ALDR+MV+RTT++ LST+ NAD+IA
Sbjct: 544 ------LKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVINADMIA 597
Query: 371 VIKNGIITEKGKHEELLNIENGVYANLAAL 282
VI G + EKG H ELL G Y+ L L
Sbjct: 598 VIYRGKMVEKGSHSELLKDPEGAYSQLIRL 627
Score = 49.7 bits (117), Expect(2) = 6e-39
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RK +IDS D SG L DI G+++ R V F YP RPD QI L I
Sbjct: 369 RKPEIDSSDTSGKILDDISGDVELRDVYFTYPARPDEQIFAGFSLFI 415
>dbj|BAM11098.1| ABC protein [Coptis japonica]
Length = 1292
Score = 191 bits (485), Expect(2) = 5e-58
Identities = 118/209 (56%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ LLQ FYDPD G+ITLDG+ I+ Q+RWLR+QMGLVSQEPVLF + + G
Sbjct: 1094 ISLLQRFYDPDSGYITLDGVEIQKLQLRWLRQQMGLVSQEPVLFNETIRANIAYGKEGDA 1153
Query: 713 NRGCDIMAAAELANAHKFISGLEQVESFNYITSFLYIRRRNLVLHFLIET*KQNNARGCT 534
+I+AAAELANAHKFIS L+Q Y T + R + L + Q
Sbjct: 1154 TE-TEILAAAELANAHKFISALQQ----GYDTM---VGERGVQL-----SGGQKQRVAIA 1200
Query: 533 CNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNADLIAVIK 363
+A K LL DEATSALDAESERVVQ ALD+VMV+RTTIV LSTIKNADLIAV+K
Sbjct: 1201 RAMVKAPKILLLDEATSALDAESERVVQDALDKVMVNRTTIVVAHRLSTIKNADLIAVVK 1260
Query: 362 NGIITEKGKHEELLNIENGVYANLAALHM 276
NG+I EKGKH+ L+NI +GVYA+L ALHM
Sbjct: 1261 NGVIVEKGKHDHLINISDGVYASLVALHM 1289
Score = 60.8 bits (146), Expect(2) = 5e-58
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQILIDICLVI 943
RKSKIDS DDSG+ L ++ G+I+ R V+FKY RPD+QIL D+ L I
Sbjct: 1028 RKSKIDSSDDSGITLENLNGDIELRHVSFKYSTRPDIQILRDLSLAI 1074
Score = 141 bits (356), Expect(2) = 3e-38
Identities = 92/213 (43%), Positives = 125/213 (58%), Gaps = 9/213 (4%)
Frame = -3
Query: 893 VGLLQ*FYDPDLGHITLDGINIRDFQIRWLREQMGLVSQEPVLFQ*HNSS*HCLRETGKC 714
+ L++ FYDP G + +DGIN+++FQ+RW+R+++GLVSQEPVLF + G
Sbjct: 442 ISLIERFYDPQAGEVLIDGINLKEFQLRWIRQKIGLVSQEPVLFASSIKDNIAYGKDGAT 501
Query: 713 NRGCDIMAAAELANAHKFISGLEQV------ESFNYITSFLYIRRRNLVLHFLIET*KQN 552
DI AAAELANA KFI L Q E +++ ++R + +++
Sbjct: 502 LE--DIKAAAELANAAKFIDKLPQGLDTLVGEHGTHLSGGQ--KQRVAIARAILKD---- 553
Query: 551 NARGCTCNGQRAKKKLLSDEATSALDAESERVVQGALDRVMVSRTTIV---GLSTIKNAD 381
+ LL DEATSALDAESE +VQ ALDRVMV+RTT+V LSTI++AD
Sbjct: 554 ------------PRILLLDEATSALDAESEHIVQEALDRVMVNRTTVVVAHRLSTIRSAD 601
Query: 380 LIAVIKNGIITEKGKHEELLNIENGVYANLAAL 282
+IAV+ G I EKG H ELL +G Y+ L L
Sbjct: 602 MIAVVHRGKIVEKGSHSELLKDPDGAYSQLIRL 634
Score = 44.3 bits (103), Expect(2) = 3e-38
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2
Query: 1083 RKSKIDSGDDSGMALGDIKGEIQFRSVNFKYPRRPDVQI 967
RK +IDS D G L DI G+I+ + + F YP RPD QI
Sbjct: 376 RKPEIDSYDTKGRVLDDIHGDIELKDICFSYPARPDEQI 414