BLASTX nr result
ID: Coptis25_contig00019197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019197
(1941 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533181.1| protein translocase secy subunit, putative [... 371 0.0
ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se... 369 0.0
ref|XP_003527188.1| PREDICTED: preprotein translocase subunit se... 363 0.0
emb|CBI24093.3| unnamed protein product [Vitis vinifera] 369 0.0
ref|XP_002324497.1| SecY protein [Populus trichocarpa] gi|222865... 375 0.0
>ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223527015|gb|EEF29204.1| protein translocase secy
subunit, putative [Ricinus communis]
Length = 557
Score = 371 bits (953), Expect(2) = 0.0
Identities = 193/216 (89%), Positives = 202/216 (93%)
Frame = -2
Query: 956 SHFLLSIGT*YCVCSVFQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFS 777
S FLL +G Y QEAERKIPLNYASRY+S++GGLQKSAYLPFKVNSSGVMPIIFS
Sbjct: 342 SFFLLVLGIVYV-----QEAERKIPLNYASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFS 396
Query: 776 TSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSE 597
TSSLALPGTLARFTGI+ALKKAAV+LNPGGA YLPTNILLIAFFNYYYTFLQLDPDDVSE
Sbjct: 397 TSSLALPGTLARFTGISALKKAAVALNPGGAFYLPTNILLIAFFNYYYTFLQLDPDDVSE 456
Query: 596 QLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFA 417
QLKRQGASIP VRPGKSTAAF+KTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFA
Sbjct: 457 QLKRQGASIPQVRPGKSTAAFLKTVLSRISVLGSGFLAILAAGPAVVEQITHLTAFRGFA 516
Query: 416 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 309
GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID
Sbjct: 517 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 552
Score = 367 bits (943), Expect(2) = 0.0
Identities = 198/292 (67%), Positives = 216/292 (73%), Gaps = 4/292 (1%)
Frame = -3
Query: 1831 TSVCRASFTVDRKPHS---TWKVDIPLNKR-CDGAGFDPLGINSDASFGLNAAWENVLXX 1664
T CRASF++ +P S T P N C+G+ FDPLGIN+D G+NAAWE++L
Sbjct: 44 TCACRASFSLQNRPTSSTTTTTTTKPWNTNSCEGSVFDPLGINTDEYSGVNAAWESILAL 103
Query: 1663 XXXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYV 1484
RGVAA+IEDSSIDFGD LALSRLGIY+
Sbjct: 104 LSPIFESASSTKRDKPSARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYI 163
Query: 1483 PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPK 1304
PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QVYPK
Sbjct: 164 PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPK 223
Query: 1303 LQELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXX 1124
LQ+LQK+EGEAGRKKILQYTRYASVGFA+VQAIGQVLYLRPYVNDFSTQW
Sbjct: 224 LQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTL 283
Query: 1123 XXXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIG 968
TY+GER +DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNY+G
Sbjct: 284 GSVFTTYLGERTSDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVG 335
>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Vitis vinifera]
Length = 546
Score = 369 bits (947), Expect(2) = 0.0
Identities = 189/217 (87%), Positives = 205/217 (94%)
Frame = -2
Query: 956 SHFLLSIGT*YCVCSVFQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFS 777
S FLL +G Y QEAERKIPLNYASRY++++GGLQKSAYLPFKVNSSGVMPIIFS
Sbjct: 332 SFFLLVLGIVYV-----QEAERKIPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFS 386
Query: 776 TSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSE 597
TSSLALPGT++RFTG+AALKKAA++LNPGG+LYLPTNILLIAFFNYYYTFLQLDPDDVSE
Sbjct: 387 TSSLALPGTVSRFTGLAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSE 446
Query: 596 QLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFA 417
QLKRQGASIPLVRPGKSTAAFIK VLSRISVLGS FLA+LAAGP+++EQTTHLTAFRGFA
Sbjct: 447 QLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFA 506
Query: 416 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK 306
GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 507 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDR 543
Score = 363 bits (932), Expect(2) = 0.0
Identities = 198/291 (68%), Positives = 215/291 (73%), Gaps = 4/291 (1%)
Frame = -3
Query: 1828 SVCRASFTVDRKPHST---WKVDIPLNKRCDGAGFDPLGINSDASFGLNAAWENVLXXXX 1658
SV RASF V KP+ST W + + N C G FDPLGI+SD S GLNA WE+ L
Sbjct: 36 SVSRASFAVHTKPNSTPNSWNLALFCNS-CKGPVFDPLGIDSDKSLGLNATWESALGLLS 94
Query: 1657 XXXXXXXXXXXXXXXXR-GVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1481
GVAA+IEDSSIDFGD LALSRLG+YVP
Sbjct: 95 QTFGSTSSTKKDKSASGQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVP 154
Query: 1480 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1301
LGGVNR+AFVGNLDQNSLL+TLDSFSGGGIGRLGICSLGIVPFINA IVFQLLTQ+YPKL
Sbjct: 155 LGGVNREAFVGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKL 214
Query: 1300 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXXX 1121
Q+LQK+EGE GRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDFSTQW
Sbjct: 215 QDLQKREGETGRKKVLQYTRYASVGFALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLG 274
Query: 1120 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIG 968
TYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNYIG
Sbjct: 275 SVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYIG 325
>ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 540
Score = 363 bits (933), Expect(2) = 0.0
Identities = 192/291 (65%), Positives = 216/291 (74%), Gaps = 1/291 (0%)
Frame = -3
Query: 1837 RTTSVCRASFTVDRKPHSTWKVDIPLNKRCDGAGFDPLGINSDASFGLNAAWEN-VLXXX 1661
+TTS+C+ASF+V R+P +W L+ + A FDPLGINSD S GLN+ W+N V
Sbjct: 32 KTTSICQASFSVQRRPTHSWNTR-HLSTSSELANFDPLGINSDLSSGLNSTWKNLVCSIT 90
Query: 1660 XXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1481
+GVAA+IEDSSIDFGD LALSRLG+Y+P
Sbjct: 91 QTFESTSSAEKGKPNSSQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIP 150
Query: 1480 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1301
LGGVNR+AFVGNLDQNSLLSTLDSFSGGGIGRLG+CSLGIVPFINA IVFQLL QVYPKL
Sbjct: 151 LGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLAQVYPKL 210
Query: 1300 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXXX 1121
Q+LQK+EGEAGRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDFST+W
Sbjct: 211 QDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVISSVILLTLG 270
Query: 1120 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIG 968
YIGERITDLKLGNGTSLLIFT+IISYLPASFGRT A+AF D NYIG
Sbjct: 271 SVFTMYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYIG 321
Score = 361 bits (927), Expect(2) = 0.0
Identities = 186/217 (85%), Positives = 199/217 (91%)
Frame = -2
Query: 956 SHFLLSIGT*YCVCSVFQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFS 777
S FLL +G Y QEAERKIPLNYASR++S+S GL+KSAYLPFKVNSSGVMPIIFS
Sbjct: 328 SFFLLVVGIVYV-----QEAERKIPLNYASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFS 382
Query: 776 TSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSE 597
TSSLALPGTLARFTG+ ALKKAAV+LNPGG+ YLP NILLIAFFNYYYTFLQLDPDDVSE
Sbjct: 383 TSSLALPGTLARFTGLTALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSE 442
Query: 596 QLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFA 417
QLKRQGASIPLVRPG++TA FIKTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFA
Sbjct: 443 QLKRQGASIPLVRPGRTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQITHLTAFRGFA 502
Query: 416 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK 306
GTS+LILVGCATDTARKVQAEIISQKYKNIEFYD DK
Sbjct: 503 GTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 539
>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 369 bits (947), Expect(2) = 0.0
Identities = 189/217 (87%), Positives = 205/217 (94%)
Frame = -2
Query: 956 SHFLLSIGT*YCVCSVFQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFS 777
S FLL +G Y QEAERKIPLNYASRY++++GGLQKSAYLPFKVNSSGVMPIIFS
Sbjct: 363 SFFLLVLGIVYV-----QEAERKIPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFS 417
Query: 776 TSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSE 597
TSSLALPGT++RFTG+AALKKAA++LNPGG+LYLPTNILLIAFFNYYYTFLQLDPDDVSE
Sbjct: 418 TSSLALPGTVSRFTGLAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSE 477
Query: 596 QLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFA 417
QLKRQGASIPLVRPGKSTAAFIK VLSRISVLGS FLA+LAAGP+++EQTTHLTAFRGFA
Sbjct: 478 QLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFA 537
Query: 416 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK 306
GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 538 GTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDR 574
Score = 352 bits (904), Expect(2) = 0.0
Identities = 198/321 (61%), Positives = 216/321 (67%), Gaps = 34/321 (10%)
Frame = -3
Query: 1828 SVCRASFTVDRKPHST---WKVDIPLNKR------------------------------C 1748
SV RASF V KP+ST W + + N+ C
Sbjct: 36 SVSRASFAVHTKPNSTPNSWNLALFCNRTFCGKKILRPTMIIYIPLDVSPNMINMDSSFC 95
Query: 1747 DGAGFDPLGINSDASFGLNAAWENVLXXXXXXXXXXXXXXXXXXXXR-GVAASIEDSSID 1571
G FDPLGI+SD S GLNA WE+ L GVAA+IEDSSID
Sbjct: 96 KGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIEDSSID 155
Query: 1570 FGDXXXXXXXXXXXXXXXXLALSRLGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGI 1391
FGD LALSRLG+YVPLGGVNR+AFVGNLDQNSLL+TLDSFSGGGI
Sbjct: 156 FGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFSGGGI 215
Query: 1390 GRLGICSLGIVPFINASIVFQLLTQVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQ 1211
GRLGICSLGIVPFINA IVFQLLTQ+YPKLQ+LQK+EGE GRKK+LQYTRYASVGFA+VQ
Sbjct: 216 GRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGFALVQ 275
Query: 1210 AIGQVLYLRPYVNDFSTQWXXXXXXXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIIS 1031
AIGQVL+LRPYVNDFSTQW TYIGERI+DLKLGNGTSLLIFTSIIS
Sbjct: 276 AIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIIS 335
Query: 1030 YLPASFGRTAAEAFQDGNYIG 968
YLPASFGRT A+AFQDGNYIG
Sbjct: 336 YLPASFGRTVAQAFQDGNYIG 356
>ref|XP_002324497.1| SecY protein [Populus trichocarpa] gi|222865931|gb|EEF03062.1| SecY
protein [Populus trichocarpa]
Length = 478
Score = 375 bits (962), Expect(2) = 0.0
Identities = 194/221 (87%), Positives = 207/221 (93%)
Frame = -2
Query: 959 YSHFLLSIGT*YCVCSVFQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIF 780
+S FLL +G Y QEAERKIPLNYASRY+S+SGGLQKSAYLPFKVNSSGVMPIIF
Sbjct: 263 FSFFLLVLGIVYV-----QEAERKIPLNYASRYTSRSGGLQKSAYLPFKVNSSGVMPIIF 317
Query: 779 STSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVS 600
STSSLALPGTLARFTGI+ALKKAA++LNPGG+ YLPTNILLIAFFNYYYTFLQLDPDDVS
Sbjct: 318 STSSLALPGTLARFTGISALKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVS 377
Query: 599 EQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGF 420
EQLKRQGASIPLVRPGKSTAAF+KTVLSRISVLGSAFLA+LAAGP+VIEQ +HLTAFRGF
Sbjct: 378 EQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSAFLAILAAGPSVIEQISHLTAFRGF 437
Query: 419 AGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK*SP 297
AGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID+ P
Sbjct: 438 AGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRYGP 478
Score = 342 bits (877), Expect(2) = 0.0
Identities = 181/260 (69%), Positives = 199/260 (76%)
Frame = -3
Query: 1747 DGAGFDPLGINSDASFGLNAAWENVLXXXXXXXXXXXXXXXXXXXXRGVAASIEDSSIDF 1568
D + FDPLGINS+ LNA+WE++L GVAA+IEDSSIDF
Sbjct: 1 DCSSFDPLGINSNVPSSLNASWESLLAFLSPIFESASSTKKDKR---GVAAAIEDSSIDF 57
Query: 1567 GDXXXXXXXXXXXXXXXXLALSRLGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIG 1388
GD LALSRLGIY+PLGGVN++AF GNLDQNSLLSTLDSFSGGGIG
Sbjct: 58 GDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNQEAFAGNLDQNSLLSTLDSFSGGGIG 117
Query: 1387 RLGICSLGIVPFINASIVFQLLTQVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQA 1208
RLGICSLGIVPFINA IVFQLL Q+YPKLQ+LQK+EGEAGRKK+LQYTRYASVGFA+VQA
Sbjct: 118 RLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKLLQYTRYASVGFAIVQA 177
Query: 1207 IGQVLYLRPYVNDFSTQWXXXXXXXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIISY 1028
IGQVLYLRPYV+DF+TQW TYIGERI+DLKLGNGTSLLIFTSIISY
Sbjct: 178 IGQVLYLRPYVDDFNTQWVLTSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSIISY 237
Query: 1027 LPASFGRTAAEAFQDGNYIG 968
LPASFGRTAAEAFQDGNY+G
Sbjct: 238 LPASFGRTAAEAFQDGNYVG 257