BLASTX nr result

ID: Coptis25_contig00019182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019182
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270372.1| PREDICTED: uncharacterized protein LOC100251...   244   8e-63
ref|XP_003530698.1| PREDICTED: uncharacterized protein LOC100808...   242   2e-62
ref|XP_002311592.1| predicted protein [Populus trichocarpa] gi|2...   240   8e-62
ref|XP_003553179.1| PREDICTED: uncharacterized protein LOC100816...   239   2e-61
ref|XP_002522426.1| prenyl-dependent CAAX protease, putative [Ri...   238   5e-61

>ref|XP_002270372.1| PREDICTED: uncharacterized protein LOC100251779 [Vitis vinifera]
           gi|296086375|emb|CBI31964.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  244 bits (622), Expect = 8e-63
 Identities = 124/134 (92%), Positives = 127/134 (94%)
 Frame = +2

Query: 2   GETPQRETDALVRLLPLIGSSGISTACLVCITGVLAPLLEETVFRGFLMVSLTKWVPTPV 181
           GETP+RETDALVRLLPLIGSS ISTACLV ITGVLAPLLEETVFRGF MVSLTKWVPTPV
Sbjct: 196 GETPERETDALVRLLPLIGSSSISTACLVGITGVLAPLLEETVFRGFFMVSLTKWVPTPV 255

Query: 182 SVLISAAVFALAHFTPGEFPQLFVLGTALGFSYSQTRNLLTPITIHALWNSGVILFLTFL 361
           SVLISAAVFALAH TP EFPQLFVLGTALGFSY+QTRNLLTPITIHA WNSGVIL LTFL
Sbjct: 256 SVLISAAVFALAHLTPSEFPQLFVLGTALGFSYAQTRNLLTPITIHATWNSGVILLLTFL 315

Query: 362 QLQGYDIRELLQAS 403
           QLQGYDI+ELLQAS
Sbjct: 316 QLQGYDIKELLQAS 329


>ref|XP_003530698.1| PREDICTED: uncharacterized protein LOC100808678 [Glycine max]
          Length = 340

 Score =  242 bits (618), Expect = 2e-62
 Identities = 121/134 (90%), Positives = 127/134 (94%)
 Frame = +2

Query: 2   GETPQRETDALVRLLPLIGSSGISTACLVCITGVLAPLLEETVFRGFLMVSLTKWVPTPV 181
           GETPQRETDALVRLLPLIGSS +STACLV ITGVLAPLLEETVFRGF M SLTKWVPTPV
Sbjct: 207 GETPQRETDALVRLLPLIGSSNLSTACLVGITGVLAPLLEETVFRGFFMTSLTKWVPTPV 266

Query: 182 SVLISAAVFALAHFTPGEFPQLFVLGTALGFSYSQTRNLLTPITIHALWNSGVILFLTFL 361
           +V+ISAAVFALAH TPGEFPQLFVLGTALGFSY+QT NLLTPITIH+ WNSGVILFLTFL
Sbjct: 267 AVVISAAVFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHSFWNSGVILFLTFL 326

Query: 362 QLQGYDIRELLQAS 403
           QLQGYDIRELLQA+
Sbjct: 327 QLQGYDIRELLQAT 340


>ref|XP_002311592.1| predicted protein [Populus trichocarpa] gi|222851412|gb|EEE88959.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  240 bits (613), Expect = 8e-62
 Identities = 120/134 (89%), Positives = 126/134 (94%)
 Frame = +2

Query: 2   GETPQRETDALVRLLPLIGSSGISTACLVCITGVLAPLLEETVFRGFLMVSLTKWVPTPV 181
           GETPQRETDALVRLLPLIGSS ISTACL+ ITGVLAP+LEE VFRGF MVSLTKWVPTPV
Sbjct: 206 GETPQRETDALVRLLPLIGSSSISTACLIGITGVLAPVLEENVFRGFFMVSLTKWVPTPV 265

Query: 182 SVLISAAVFALAHFTPGEFPQLFVLGTALGFSYSQTRNLLTPITIHALWNSGVILFLTFL 361
           SVLISAAVFALAH TPGEFPQLFVLGTALGFSY+QTRNLLTPITIHA WNSGV+L LT L
Sbjct: 266 SVLISAAVFALAHLTPGEFPQLFVLGTALGFSYAQTRNLLTPITIHAFWNSGVVLILTLL 325

Query: 362 QLQGYDIRELLQAS 403
           QLQGYDI+ELLQA+
Sbjct: 326 QLQGYDIKELLQAT 339


>ref|XP_003553179.1| PREDICTED: uncharacterized protein LOC100816434 [Glycine max]
          Length = 345

 Score =  239 bits (609), Expect = 2e-61
 Identities = 119/134 (88%), Positives = 126/134 (94%)
 Frame = +2

Query: 2   GETPQRETDALVRLLPLIGSSGISTACLVCITGVLAPLLEETVFRGFLMVSLTKWVPTPV 181
           GETPQRETDALVRLLPLIGSS +STACLV ITGVLAPLLEETVFRGF M SLTKWVPTPV
Sbjct: 212 GETPQRETDALVRLLPLIGSSNLSTACLVGITGVLAPLLEETVFRGFFMTSLTKWVPTPV 271

Query: 182 SVLISAAVFALAHFTPGEFPQLFVLGTALGFSYSQTRNLLTPITIHALWNSGVILFLTFL 361
           +V+ISAA+FALAH TPGEFPQLFVLGTALGFSY+QT NLLTPITIH+ WNSGVIL LTFL
Sbjct: 272 AVVISAALFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHSFWNSGVILLLTFL 331

Query: 362 QLQGYDIRELLQAS 403
           QLQGYDIRELLQA+
Sbjct: 332 QLQGYDIRELLQAT 345


>ref|XP_002522426.1| prenyl-dependent CAAX protease, putative [Ricinus communis]
           gi|223538311|gb|EEF39918.1| prenyl-dependent CAAX
           protease, putative [Ricinus communis]
          Length = 341

 Score =  238 bits (606), Expect = 5e-61
 Identities = 118/134 (88%), Positives = 126/134 (94%)
 Frame = +2

Query: 2   GETPQRETDALVRLLPLIGSSGISTACLVCITGVLAPLLEETVFRGFLMVSLTKWVPTPV 181
           GE PQRETDALVRLLPLIGSS ISTACLV ITGVLAP+LEETVFRGF MVSLTKWVPTP+
Sbjct: 208 GEPPQRETDALVRLLPLIGSSSISTACLVVITGVLAPILEETVFRGFFMVSLTKWVPTPI 267

Query: 182 SVLISAAVFALAHFTPGEFPQLFVLGTALGFSYSQTRNLLTPITIHALWNSGVILFLTFL 361
           +VLISAAVFA+AH TPGEFPQLFVLGTALGFSY+QTRNLLT ITIHA WNSGVIL LTFL
Sbjct: 268 AVLISAAVFAIAHLTPGEFPQLFVLGTALGFSYAQTRNLLTSITIHACWNSGVILILTFL 327

Query: 362 QLQGYDIRELLQAS 403
           QLQGYDI+E+LQA+
Sbjct: 328 QLQGYDIKEILQAT 341


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