BLASTX nr result

ID: Coptis25_contig00019177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019177
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607899.1| Xylogalacturonan beta-1,3-xylosyltransferase...    59   3e-07
gb|ABN04854.1| Exostosin-like [Medicago truncatula]                    59   3e-07
ref|XP_002322391.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_003607899.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula]
           gi|355508954|gb|AES90096.1| Xylogalacturonan
           beta-1,3-xylosyltransferase [Medicago truncatula]
          Length = 481

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = -1

Query: 246 ILLIIISFYAFFNTFLSPFINSDNTITPSNFPFFESSLLSTPIISESSNSHKVRIFLYDL 67
           I  +++  YA FNTF  P   +D++   S+   F S+  S  + S +S S  V+++LYDL
Sbjct: 43  IFFVLLLLYALFNTFFQP---TDSSTFDSSTFSFNSATSSVLLSSAASKSPAVKVYLYDL 99

Query: 66  PRKFTYGVIESYLIAR 19
           P++FTYGVI  + +AR
Sbjct: 100 PKRFTYGVIHHHSLAR 115


>gb|ABN04854.1| Exostosin-like [Medicago truncatula]
          Length = 303

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = -1

Query: 246 ILLIIISFYAFFNTFLSPFINSDNTITPSNFPFFESSLLSTPIISESSNSHKVRIFLYDL 67
           I  +++  YA FNTF  P   +D++   S+   F S+  S  + S +S S  V+++LYDL
Sbjct: 43  IFFVLLLLYALFNTFFQP---TDSSTFDSSTFSFNSATSSVLLSSAASKSPAVKVYLYDL 99

Query: 66  PRKFTYGVIESYLIAR 19
           P++FTYGVI  + +AR
Sbjct: 100 PKRFTYGVIHHHSLAR 115


>ref|XP_002322391.1| predicted protein [Populus trichocarpa] gi|222869387|gb|EEF06518.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
 Frame = -1

Query: 234 IISFYAFFNTFLSPFINSDNTITPSNFPFFESSLLSTPIISES---------SNSHKVRI 82
           I+  YAFFNTFLS    S      +      SSL +  I  E+          N  KVR+
Sbjct: 19  ILIIYAFFNTFLS----SSTAAATTGISATTSSLFAEQISRENLLEFPEKATENEKKVRV 74

Query: 81  FLYDLPRKFTYGVIESYLIAR 19
           F+YDLP+KFT G+IE++ +AR
Sbjct: 75  FMYDLPKKFTTGIIENHALAR 95


Top