BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019168
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256...   166   2e-39
emb|CBI20745.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, put...   157   7e-37
ref|XP_003576570.1| PREDICTED: uncharacterized protein LOC100843...   153   1e-35

>ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
          Length = 842

 Score =  166 bits (419), Expect = 2e-39
 Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 21/181 (11%)
 Frame = +2

Query: 26  NDTRP-RSPQRVADVSAVLQWLRGLGLSRYEESFVKEEVDWETLQWLTEEDLLSIGVTAL 202
           ND  P ++ Q+V DVS V+ W+  LGL RYEE+F++EE+DW+TLQ LTEEDLL+IGVTAL
Sbjct: 336 NDGSPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTEEDLLNIGVTAL 395

Query: 203 GPRKKIINALNELRKGSTH-----------------ANHR---NGDASKVSSDENTKLLG 322
           GPRK+I++AL+ELRKGSTH                 + H      DASK + DE +KL  
Sbjct: 396 GPRKRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASKATVDETSKLAA 455

Query: 323 NKLITEYFPGSCIVDRKRERPQSLQEQKLERKNKGSTLRGDTSRNSARKGKTKDIPPWCC 502
           NKLIT+YFPGS + DR R    S + +  E+   GS+ +    +N AR GK +D+P WCC
Sbjct: 456 NKLITDYFPGS-VTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSGKLRDLPLWCC 514

Query: 503 I 505
           I
Sbjct: 515 I 515


>emb|CBI20745.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  166 bits (419), Expect = 2e-39
 Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 21/181 (11%)
 Frame = +2

Query: 26  NDTRP-RSPQRVADVSAVLQWLRGLGLSRYEESFVKEEVDWETLQWLTEEDLLSIGVTAL 202
           ND  P ++ Q+V DVS V+ W+  LGL RYEE+F++EE+DW+TLQ LTEEDLL+IGVTAL
Sbjct: 217 NDGSPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTEEDLLNIGVTAL 276

Query: 203 GPRKKIINALNELRKGSTH-----------------ANHR---NGDASKVSSDENTKLLG 322
           GPRK+I++AL+ELRKGSTH                 + H      DASK + DE +KL  
Sbjct: 277 GPRKRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASKATVDETSKLAA 336

Query: 323 NKLITEYFPGSCIVDRKRERPQSLQEQKLERKNKGSTLRGDTSRNSARKGKTKDIPPWCC 502
           NKLIT+YFPGS + DR R    S + +  E+   GS+ +    +N AR GK +D+P WCC
Sbjct: 337 NKLITDYFPGS-VTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSGKLRDLPLWCC 395

Query: 503 I 505
           I
Sbjct: 396 I 396


>ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|222855429|gb|EEE92976.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score =  160 bits (405), Expect = 1e-37
 Identities = 88/173 (50%), Positives = 111/173 (64%), Gaps = 20/173 (11%)
 Frame = +2

Query: 47  PQRVADVSAVLQWLRGLGLSRYEESFVKEEVDWETLQWLTEEDLLSIGVTALGPRKKIIN 226
           P++V  VS V++WLR LGL RYEE FV+EE+DWETLQWLTEEDL  IGVTALGPRKKI++
Sbjct: 244 PKKVV-VSPVVKWLRNLGLERYEEDFVREEIDWETLQWLTEEDLFGIGVTALGPRKKIVH 302

Query: 227 ALNELRKGSTHANHRNGD--------------------ASKVSSDENTKLLGNKLITEYF 346
           AL+ELRKGS HA   +GD                    ASK+  D+ +K   NKLIT+YF
Sbjct: 303 ALSELRKGSNHAIEAHGDAHAFGEVGSRRSHGAEMQVEASKIIGDDTSKPTANKLITDYF 362

Query: 347 PGSCIVDRKRERPQSLQEQKLERKNKGSTLRGDTSRNSARKGKTKDIPPWCCI 505
           PGS  V  K++     +EQ+   K++   +R    +N  +KGK KDIP WC I
Sbjct: 363 PGS--VPIKKKTSVISKEQRGAEKSQPGYVRKQGVKNYTKKGKFKDIPLWCSI 413


>ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223544650|gb|EEF46166.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 737

 Score =  157 bits (398), Expect = 7e-37
 Identities = 85/175 (48%), Positives = 110/175 (62%), Gaps = 21/175 (12%)
 Frame = +2

Query: 44  SPQRVADVSAVLQWLRGLGLSRYEESFVKEEVDWETLQWLTEEDLLSIGVTALGPRKKII 223
           S  +V DVS VLQWLR LGL RY ++F++EE+DW++L+WLTEEDL SIGVTALGPRKKI+
Sbjct: 236 SGHKVVDVSPVLQWLRNLGLERYGDAFIREEIDWDSLKWLTEEDLFSIGVTALGPRKKIV 295

Query: 224 NALNELRKG--------------------STHANHRNGDASKVSSDENTKLLGNKLITEY 343
           +AL ELRKG                    STHA     +ASKVS DE +K   NKLIT+Y
Sbjct: 296 HALAELRKGCNLVDETHRDPNASADVGSLSTHAAEMQMEASKVSGDETSKQTANKLITDY 355

Query: 344 FPGSCIVDRKRERPQSLQEQKLERKNKGSTLRGDTSRN-SARKGKTKDIPPWCCI 505
           FPGS  V  + +     +E++   KN+  ++    ++N   + GK KDIP WC I
Sbjct: 356 FPGSVSVTVREKGCSIAKEKRGPAKNRPDSVHKRMAKNHPVKNGKLKDIPLWCSI 410


>ref|XP_003576570.1| PREDICTED: uncharacterized protein LOC100843196 [Brachypodium
           distachyon]
          Length = 910

 Score =  153 bits (387), Expect = 1e-35
 Identities = 81/168 (48%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
 Frame = +2

Query: 8   KVDPSTNDTRPRSPQRVADVSAVLQWLRGLGLSRYEESFVKEEVDWETLQWLTEEDLLSI 187
           K   S ++  P + + + +   VL+WLR LGLS+YEE F+KEEVDWETLQWLTEEDLL +
Sbjct: 418 KESKSNHERGPCAGENIEN-KCVLEWLRNLGLSKYEECFIKEEVDWETLQWLTEEDLLGM 476

Query: 188 GVTALGPRKKIINALNELRKGSTHANHRNGDASKVSSDENTKL--LGNKLITEYFPGSCI 361
           G+ +LGPRKKI++AL ELRK +  AN    +     ++  TKL   GNKLITEYF   C 
Sbjct: 477 GINSLGPRKKIVHALGELRKKNDRANDTEPEVLFSENNNRTKLPMNGNKLITEYF--QCF 534

Query: 362 VDRKRERPQSLQEQKLERKNKGSTLRGDTSRNSARKGKTKDIPPWCCI 505
              +++R + +Q+       K S+ +  TSR+  RKGK KD P WCCI
Sbjct: 535 SSDQKQRDRKVQKPSNLNSQKKSSAKVATSRSLIRKGKVKDTPIWCCI 582