BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019167
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, put...    91   1e-16
ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256...    80   1e-13
emb|CBI20745.3| unnamed protein product [Vitis vinifera]               80   1e-13
dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group] gi|5...    79   4e-13

>ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223544650|gb|EEF46166.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 737

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
 Frame = +1

Query: 58  DKGEFESKNGYVSNSIESRLLASRRGNSYNVNE---DFEAGTQLNDLIELCLERGDEFPE 228
           ++G    K GY+ NSIES+L+  R G S +V +   DFE  + L+ LI+LC +  ++ P 
Sbjct: 116 EEGLEVKKKGYLCNSIESKLI--RSGVSDSVGDEFGDFEEDSDLDLLIKLCTDEMNQVPS 173

Query: 229 GNGLVDGLVECPLCGIDISDMSEELRHVHTNECLDKNDLH--KVDPSTND 372
           G    D LV+CPLCGIDIS++SEE R VHTN+CLDK D H  +V   +ND
Sbjct: 174 GVADGDCLVQCPLCGIDISNLSEESRLVHTNDCLDKQDNHLQEVTCGSND 223


>ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|222855429|gb|EEE92976.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
 Frame = +1

Query: 1   VSCENNTTCFTERVLFECNDKGEFESKNGYVSNSIESRLLASR---RGNSYNVNEDFEAG 171
           + C  ++    E+       K + E   GY+ NSIE+RL+ SR    G +    EDFE  
Sbjct: 93  IDCTVSSKVGNEKFDSGSGKKEKLEVSGGYLCNSIEARLMKSRVDYSGVNVGNEEDFEEN 152

Query: 172 TQLNDLIELCLERGDEFPEG------NGLVDGLVECPLCGIDISDMSEELRHVHTNECLD 333
           ++L+ LI+LC E  +           NG     V CPLCG DISD+SEE R VHTNECLD
Sbjct: 153 SELDALIKLCTEEEESEAREKIKVNCNGDECCFVLCPLCGTDISDLSEEFRLVHTNECLD 212

Query: 334 K--NDLHKVDPSTNDTRP 381
           K  N +  V    +D RP
Sbjct: 213 KEENSVTYVVLGGDDGRP 230


>ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
          Length = 842

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 52/113 (46%), Positives = 64/113 (56%), Gaps = 19/113 (16%)
 Frame = +1

Query: 73  ESKNGYVSNSIESRLLASRRGNSYNVN--------EDFEAGTQLNDLIELCLERGDEFPE 228
           ES+  Y  NS+ESRLL SR G   + N        EDFE   QL+ LI LC E G+E P+
Sbjct: 213 ESEGSYSCNSVESRLLKSRSGGDGDGNGGFCEESDEDFE---QLDVLIRLCSE-GEEEPD 268

Query: 229 GNGLV-----------DGLVECPLCGIDISDMSEELRHVHTNECLDKNDLHKV 354
            +G              GLV CPLC IDISD+++ELR VHTN CLD+ +   V
Sbjct: 269 SDGFRFREQRGSGSEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLEADNV 321


>emb|CBI20745.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 52/113 (46%), Positives = 64/113 (56%), Gaps = 19/113 (16%)
 Frame = +1

Query: 73  ESKNGYVSNSIESRLLASRRGNSYNVN--------EDFEAGTQLNDLIELCLERGDEFPE 228
           ES+  Y  NS+ESRLL SR G   + N        EDFE   QL+ LI LC E G+E P+
Sbjct: 94  ESEGSYSCNSVESRLLKSRSGGDGDGNGGFCEESDEDFE---QLDVLIRLCSE-GEEEPD 149

Query: 229 GNGLV-----------DGLVECPLCGIDISDMSEELRHVHTNECLDKNDLHKV 354
            +G              GLV CPLC IDISD+++ELR VHTN CLD+ +   V
Sbjct: 150 SDGFRFREQRGSGSEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLEADNV 202


>dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group]
           gi|51091393|dbj|BAD36136.1| putative SNM1 [Oryza sativa
           Japonica Group]
          Length = 1024

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
 Frame = +1

Query: 10  ENNTTCFTERVLFECNDKGEFES-----KNGYVSNSIESRLLASRRGNSYNVN--EDFEA 168
           E  T        F   ++G   S     K  +  + +E +L+ S   ++   +  +DFE 
Sbjct: 398 EERTVAAEGDATFTFEERGNTSSGLEACKGSHCLDPVEPKLMDSCATHALEGDGCDDFEI 457

Query: 169 GTQLNDLIELCLERGDEFP--------EGNGLVDGL------VECPLCGIDISDMSEELR 306
           GTQLN+LI LC+E   E P        EGNG+  G       V+CPLCG +ISD+SEELR
Sbjct: 458 GTQLNELINLCMEDYTEGPLSNKVACLEGNGMDCGSFNSSCEVQCPLCGSNISDLSEELR 517

Query: 307 HVHTNECLDKNDLHKVDPSTNDTRP 381
            VHTN CLD +   K   S N   P
Sbjct: 518 LVHTNSCLDGDKPAKEPNSDNQNEP 542