BLASTX nr result

ID: Coptis25_contig00019159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019159
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...    60   2e-07
emb|CBI25886.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CBI18834.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]    60   2e-07
ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, ch...    55   8e-06

>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -1

Query: 429 QDVKPLETSAIMGIGLQEVLNLIDEKLDKQNVAGTRSFDKFNRKWRPPRNADVDTAV 259
           Q +  ++TSA+MG+GLQE+L LIDEKL+ Q V     FD   RKWRPP   DV  AV
Sbjct: 501 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFD---RKWRPPHTEDVGVAV 554


>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -1

Query: 429 QDVKPLETSAIMGIGLQEVLNLIDEKLDKQNVAGTRSFDKFNRKWRPPRNADVDTAV 259
           Q +  ++TSA+MG+GLQE+L LIDEKL+ Q V     FD   RKWRPP   DV  AV
Sbjct: 526 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFD---RKWRPPHTEDVGVAV 579


>emb|CBI18834.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -1

Query: 429 QDVKPLETSAIMGIGLQEVLNLIDEKLDKQNVAGTRSFDKFNRKWRPPRNADVDTAV 259
           Q +  ++TSA+MG+GLQE+L LIDEKL+ Q V     FD   RKWRPP   DV  AV
Sbjct: 158 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFD---RKWRPPHTEDVGVAV 211


>emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
          Length = 743

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -1

Query: 429 QDVKPLETSAIMGIGLQEVLNLIDEKLDKQNVAGTRSFDKFNRKWRPPRNADVDTAV 259
           Q +  ++TSA+MG+GLQE+L LIDEKL+ Q V     FD   RKWRPP   DV  AV
Sbjct: 689 QCIPHVKTSAVMGVGLQELLALIDEKLETQKVPERNYFD---RKWRPPHTEDVGVAV 742


>ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
           [Glycine max]
          Length = 594

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
 Frame = -1

Query: 414 LETSAIMGIGLQEVLNLIDEKLDKQNVAGTRSFDK--FNRKWRPPRNADVDTAVGQ 253
           ++TSA+ G+GLQE+L LID+KL  QN  G R  ++  ++RKWRP  N +   AV Q
Sbjct: 539 VKTSAVTGVGLQELLELIDKKLSVQNKKGARVVERSIYDRKWRPSHNQESGIAVEQ 594


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