BLASTX nr result

ID: Coptis25_contig00019158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019158
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512339.1| Kinesin heavy chain, putative [Ricinus commu...   317   4e-84
ref|XP_002281127.2| PREDICTED: kinesin-related protein 3-like [V...   305   2e-80
ref|XP_002878519.1| hypothetical protein ARALYDRAFT_907935 [Arab...   299   2e-78
ref|NP_850742.1| ATP binding microtubule motor family protein [A...   298   3e-78
ref|NP_567148.1| ATP binding microtubule motor family protein [A...   292   1e-76

>ref|XP_002512339.1| Kinesin heavy chain, putative [Ricinus communis]
            gi|223548300|gb|EEF49791.1| Kinesin heavy chain, putative
            [Ricinus communis]
          Length = 482

 Score =  317 bits (813), Expect = 4e-84
 Identities = 180/309 (58%), Positives = 226/309 (73%), Gaps = 1/309 (0%)
 Frame = -1

Query: 1275 SKYNIQIKESKAQGIFLSGATEVSISDPAEALRHLSDRISNRAVGETQINLASSRSHCSY 1096
            SK NI IKESK+ GI LSG TE++IS+P EAL+ LS+ + NRAVGETQ+N+ASSRSHC Y
Sbjct: 153  SKDNILIKESKSHGILLSGVTEITISEPTEALQSLSNGVVNRAVGETQMNMASSRSHCIY 212

Query: 1095 IFSVVRQDLRQDRIKTGKLILVDLAGCEKAEKTRAEGKVLEEAKTINKSLSALGNVINAL 916
            IF+V +Q L + RIKTGK+ILVDLAG EK EKT AEGKVLEEAKTINKSLSALGNVINAL
Sbjct: 213  IFTV-QQALAEKRIKTGKVILVDLAGSEKVEKTGAEGKVLEEAKTINKSLSALGNVINAL 271

Query: 915  TSGSTVKTNHLPFRDSKLTRILQDALSGNSRTAVLCCCSPSTSNALETLSTLRFGARAKH 736
            T G + K  H+P+RDSKLTRILQDAL G  RTA+LCCCSPS  NA ETLSTLRFG RAKH
Sbjct: 272  TCGPSTKATHIPYRDSKLTRILQDALGGTCRTALLCCCSPSPLNATETLSTLRFGTRAKH 331

Query: 735  IKTSARVNCIEDGVDKNSRSNRFPLHLRTKDATEF*TSCEKRWRMN-K*SFWRSYLFILE 559
            IK++  VN  ED + K  +++       TKD +        R R++ +       LFILE
Sbjct: 332  IKSAPFVNQSEDKLAKRHKTDS-----PTKDESCGRILNRLRERLDIEDVELLEELFILE 386

Query: 558  GIFVDPSSIEDLETAHADAITRAFTSLYQAEDEQKGINKKLKRENYLLKAKLIVAEQVDS 379
            GI  DP+S+EDLE+A+ D  ++  +SL QA +E +   ++LK EN  LKA++  AE+V +
Sbjct: 387  GILFDPNSVEDLESAYEDVTSQTISSLQQAVEELRFTIEELKCENKALKARIAAAERVST 446

Query: 378  VEKDVKEDA 352
            V K+ +++A
Sbjct: 447  VNKETQKNA 455


>ref|XP_002281127.2| PREDICTED: kinesin-related protein 3-like [Vitis vinifera]
          Length = 482

 Score =  305 bits (781), Expect = 2e-80
 Identities = 181/309 (58%), Positives = 214/309 (69%), Gaps = 8/309 (2%)
 Frame = -1

Query: 1272 KYNIQIKESKAQGIFLSGATEVSISDPAEALRHLSDRISNRAVGETQINLASSRSHCSYI 1093
            K NIQIKESK  GI LSG TEVSI D  EAL  LS  I+NRAVGETQ+N+ASSRSHC YI
Sbjct: 154  KDNIQIKESKVHGILLSGVTEVSILDSTEALHSLSRGIANRAVGETQMNMASSRSHCVYI 213

Query: 1092 FSVVRQDLRQDRIKTGKLILVDLAGCEKAEKTRAEGKVLEEAKTINKSLSALGNVINALT 913
            F+V ++  +  RI+TGKLILVDLAG EK EKT AEGK+L+EAKTINKSLSALGNVINALT
Sbjct: 214  FTVQQEFPKDKRIRTGKLILVDLAGSEKVEKTGAEGKLLDEAKTINKSLSALGNVINALT 273

Query: 912  SGSTVKTNHLPFRDSKLTRILQDALSGNSRTAVLCCCSPSTSNALETLSTLRFGARAKHI 733
                 + NH+P+RDSKLTRILQDAL GNSRTA+LCCCSPS SNA E+LSTLRFGARAKHI
Sbjct: 274  CSPQGRANHIPYRDSKLTRILQDALGGNSRTALLCCCSPSPSNASESLSTLRFGARAKHI 333

Query: 732  KTSARVNCIEDGVDKNSRSNRFPLHLRTKDATEF*TSCEKRWRMNK*S--------FWRS 577
            K S RV+  +D   K   +        +KD      SCE+   +NK +            
Sbjct: 334  KASPRVSHNDDKYTKKHGTQS-----PSKDG-----SCER--ILNKLTEKLDIEDVNLLE 381

Query: 576  YLFILEGIFVDPSSIEDLETAHADAITRAFTSLYQAEDEQKGINKKLKRENYLLKAKLIV 397
             LFILEGIF  P+S+EDLE    D   R  +SL +A +E   I ++LK EN  LK +L  
Sbjct: 382  ELFILEGIFSYPNSVEDLELTLEDVALRTISSLQEALEELTLIVEELKIENKALKFRLAA 441

Query: 396  AEQVDSVEK 370
            AE+VD++ K
Sbjct: 442  AERVDTLNK 450


>ref|XP_002878519.1| hypothetical protein ARALYDRAFT_907935 [Arabidopsis lyrata subsp.
            lyrata] gi|297324357|gb|EFH54778.1| hypothetical protein
            ARALYDRAFT_907935 [Arabidopsis lyrata subsp. lyrata]
          Length = 469

 Score =  299 bits (765), Expect = 2e-78
 Identities = 167/306 (54%), Positives = 213/306 (69%), Gaps = 4/306 (1%)
 Frame = -1

Query: 1275 SKYNIQIKESKAQGIFLSGATEVS----ISDPAEALRHLSDRISNRAVGETQINLASSRS 1108
            SK NIQIKE+K QGI LSG TE S    +SD AEAL+HL   ++NRAVGETQ+N++SSRS
Sbjct: 154  SKANIQIKENKTQGILLSGVTEASFIVPVSDSAEALQHLCTGLANRAVGETQMNMSSSRS 213

Query: 1107 HCSYIFSVVRQDLRQDRIKTGKLILVDLAGCEKAEKTRAEGKVLEEAKTINKSLSALGNV 928
            HC+Y+F++ +  ++  R+KTGKLILVDLAG EKA+KT AEG+VLEEAKTINKSLSALGNV
Sbjct: 214  HCAYLFTIQQDSVKDKRVKTGKLILVDLAGSEKADKTGAEGRVLEEAKTINKSLSALGNV 273

Query: 927  INALTSGSTVKTNHLPFRDSKLTRILQDALSGNSRTAVLCCCSPSTSNALETLSTLRFGA 748
            INALTSGS+ K NH+P+RDSKLTRILQDAL GNSR A+LCCCSPST NA ETLSTLRFG 
Sbjct: 274  INALTSGSSSKANHIPYRDSKLTRILQDALGGNSRMALLCCCSPSTLNASETLSTLRFGM 333

Query: 747  RAKHIKTSARVNCIEDGVDKNSRSNRFPLHLRTKDATEF*TSCEKRWRMNK*SFWRSYLF 568
            RAKHIK S R + +     K++++   P  +   +         K    N+       +F
Sbjct: 334  RAKHIKASPRASEV-----KSAQAQEEPSSVTKDEKCGRILEKMKERMSNEDIKMLEEVF 388

Query: 567  ILEGIFVDPSSIEDLETAHADAITRAFTSLYQAEDEQKGINKKLKRENYLLKAKLIVAEQ 388
            I EGI     S+E++ETA+ D +++   SL QA DE +   KKL+ EN  ++ + +   +
Sbjct: 389  IQEGIIFSLDSMEEVETAYEDIVSKTIQSLQQAVDELQLKVKKLEAENMGIQVQALCNHE 448

Query: 387  VDSVEK 370
               V K
Sbjct: 449  PGPVGK 454


>ref|NP_850742.1| ATP binding microtubule motor family protein [Arabidopsis thaliana]
            gi|26453185|dbj|BAC43667.1| putative kinesin heavy chain
            [Arabidopsis thaliana] gi|28951063|gb|AAO63455.1|
            At3g63480 [Arabidopsis thaliana]
            gi|332646970|gb|AEE80491.1| ATP binding microtubule motor
            family protein [Arabidopsis thaliana]
          Length = 465

 Score =  298 bits (762), Expect = 3e-78
 Identities = 164/302 (54%), Positives = 210/302 (69%)
 Frame = -1

Query: 1275 SKYNIQIKESKAQGIFLSGATEVSISDPAEALRHLSDRISNRAVGETQINLASSRSHCSY 1096
            SK NIQIKE+K QGI LSG TEV +SD  EAL+HL   ++NRAVGETQ+N++SSRSHC+Y
Sbjct: 154  SKANIQIKENKTQGILLSGVTEVPVSDSVEALQHLCTGLANRAVGETQMNMSSSRSHCAY 213

Query: 1095 IFSVVRQDLRQDRIKTGKLILVDLAGCEKAEKTRAEGKVLEEAKTINKSLSALGNVINAL 916
            +F++ +  ++  R+KTGKLILVDLAG EKA+KT AEG+VLEEAKTINKSLSALGNVINAL
Sbjct: 214  LFTIQQDSVKDKRVKTGKLILVDLAGSEKADKTGAEGRVLEEAKTINKSLSALGNVINAL 273

Query: 915  TSGSTVKTNHLPFRDSKLTRILQDALSGNSRTAVLCCCSPSTSNALETLSTLRFGARAKH 736
            TSG + K NH+P+RDSKLTRILQDAL GNSR A+LCCCSPST NA ETLSTLRFG RAKH
Sbjct: 274  TSGPSSKGNHIPYRDSKLTRILQDALGGNSRMALLCCCSPSTLNASETLSTLRFGMRAKH 333

Query: 735  IKTSARVNCIEDGVDKNSRSNRFPLHLRTKDATEF*TSCEKRWRMNK*SFWRSYLFILEG 556
            IK S R + +     K++++   P  +   +         K    N+       +FI EG
Sbjct: 334  IKASPRASEV-----KSAKAQEEPSSVTKDEKCGRILEKMKERMSNEDIKMLEDVFIQEG 388

Query: 555  IFVDPSSIEDLETAHADAITRAFTSLYQAEDEQKGINKKLKRENYLLKAKLIVAEQVDSV 376
            I     S+ ++ET + D +++   SL QA DE +   KKL+ EN  ++ + +   +  SV
Sbjct: 389  IIFSLDSMAEVETVYEDIVSKTIQSLQQAVDELQQKVKKLEAENIGIQEQALRNHEPGSV 448

Query: 375  EK 370
             K
Sbjct: 449  GK 450


>ref|NP_567148.1| ATP binding microtubule motor family protein [Arabidopsis thaliana]
            gi|332646969|gb|AEE80490.1| ATP binding microtubule motor
            family protein [Arabidopsis thaliana]
          Length = 469

 Score =  292 bits (748), Expect = 1e-76
 Identities = 164/306 (53%), Positives = 210/306 (68%), Gaps = 4/306 (1%)
 Frame = -1

Query: 1275 SKYNIQIKESKAQGIFLSGATEVS----ISDPAEALRHLSDRISNRAVGETQINLASSRS 1108
            SK NIQIKE+K QGI LSG TE S    +SD  EAL+HL   ++NRAVGETQ+N++SSRS
Sbjct: 154  SKANIQIKENKTQGILLSGVTEASFIVPVSDSVEALQHLCTGLANRAVGETQMNMSSSRS 213

Query: 1107 HCSYIFSVVRQDLRQDRIKTGKLILVDLAGCEKAEKTRAEGKVLEEAKTINKSLSALGNV 928
            HC+Y+F++ +  ++  R+KTGKLILVDLAG EKA+KT AEG+VLEEAKTINKSLSALGNV
Sbjct: 214  HCAYLFTIQQDSVKDKRVKTGKLILVDLAGSEKADKTGAEGRVLEEAKTINKSLSALGNV 273

Query: 927  INALTSGSTVKTNHLPFRDSKLTRILQDALSGNSRTAVLCCCSPSTSNALETLSTLRFGA 748
            INALTSG + K NH+P+RDSKLTRILQDAL GNSR A+LCCCSPST NA ETLSTLRFG 
Sbjct: 274  INALTSGPSSKGNHIPYRDSKLTRILQDALGGNSRMALLCCCSPSTLNASETLSTLRFGM 333

Query: 747  RAKHIKTSARVNCIEDGVDKNSRSNRFPLHLRTKDATEF*TSCEKRWRMNK*SFWRSYLF 568
            RAKHIK S R + +     K++++   P  +   +         K    N+       +F
Sbjct: 334  RAKHIKASPRASEV-----KSAKAQEEPSSVTKDEKCGRILEKMKERMSNEDIKMLEDVF 388

Query: 567  ILEGIFVDPSSIEDLETAHADAITRAFTSLYQAEDEQKGINKKLKRENYLLKAKLIVAEQ 388
            I EGI     S+ ++ET + D +++   SL QA DE +   KKL+ EN  ++ + +   +
Sbjct: 389  IQEGIIFSLDSMAEVETVYEDIVSKTIQSLQQAVDELQQKVKKLEAENIGIQEQALRNHE 448

Query: 387  VDSVEK 370
              SV K
Sbjct: 449  PGSVGK 454


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