BLASTX nr result

ID: Coptis25_contig00019132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019132
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280846.2| PREDICTED: ADP-ribosylation factor GTPase-ac...   134   6e-30
emb|CBI15750.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CBI29251.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002303749.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   124   8e-27

>ref|XP_002280846.2| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Vitis vinifera]
          Length = 822

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/103 (59%), Positives = 87/103 (84%)
 Frame = -2

Query: 454  EDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTALHHCVIRGKSVFA 275
            ED+++E   +G SLL +AC+ AD+GM+ELLLQYGA+INA+DS GQT LHHC+IRG++  A
Sbjct: 720  EDQSMEGCHDGCSLLHLACQAADIGMVELLLQYGADINASDSMGQTPLHHCIIRGRTAIA 779

Query: 274  KLLLTRGANTQAVDREGRTPLQHAAKSSLNDNELLSMLADTNR 146
            K+LL RGA+ QAVD+EG+TPL+  A+S+++D+E+L++L  TNR
Sbjct: 780  KILLKRGADPQAVDKEGKTPLRLVAESTIDDSEVLALLKQTNR 822


>emb|CBI15750.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/103 (59%), Positives = 87/103 (84%)
 Frame = -2

Query: 454  EDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTALHHCVIRGKSVFA 275
            ED+++E   +G SLL +AC+ AD+GM+ELLLQYGA+INA+DS GQT LHHC+IRG++  A
Sbjct: 725  EDQSMEGCHDGCSLLHLACQAADIGMVELLLQYGADINASDSMGQTPLHHCIIRGRTAIA 784

Query: 274  KLLLTRGANTQAVDREGRTPLQHAAKSSLNDNELLSMLADTNR 146
            K+LL RGA+ QAVD+EG+TPL+  A+S+++D+E+L++L  TNR
Sbjct: 785  KILLKRGADPQAVDKEGKTPLRLVAESTIDDSEVLALLKQTNR 827


>emb|CBI29251.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/96 (62%), Positives = 81/96 (84%)
 Frame = -2

Query: 436  ESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTALHHCVIRGKSVFAKLLLTR 257
            E F+G SLL +ACETAD+GM+ELLLQYGANINA DSRGQ  LH C++RGK+ FAKLLLTR
Sbjct: 736  EDFDGWSLLHLACETADIGMLELLLQYGANINACDSRGQMPLHRCILRGKATFAKLLLTR 795

Query: 256  GANTQAVDREGRTPLQHAAKSSLNDNELLSMLADTN 149
            GA+ +AV+ EG+TP + A +S+  D+++L++L+D+N
Sbjct: 796  GADPRAVNGEGKTPFELAVESNFVDSDVLALLSDSN 831


>ref|XP_002303749.1| predicted protein [Populus trichocarpa] gi|222841181|gb|EEE78728.1|
            predicted protein [Populus trichocarpa]
          Length = 830

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/96 (59%), Positives = 81/96 (84%)
 Frame = -2

Query: 436  ESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTALHHCVIRGKSVFAKLLLTR 257
            E  +G +LL +ACETAD+GM+ELLLQYGANIN+TDSRGQT LH C++RG+   AKLLL+R
Sbjct: 734  EDLDGCTLLHLACETADIGMLELLLQYGANINSTDSRGQTPLHRCILRGRPFLAKLLLSR 793

Query: 256  GANTQAVDREGRTPLQHAAKSSLNDNELLSMLADTN 149
            GA+ +AV+ EG+TPL+ A +S  +++E+L++L+D+N
Sbjct: 794  GADPRAVNGEGKTPLELAIESGFDESEVLALLSDSN 829


>ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1228

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/103 (56%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = -2

Query: 454  EDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTALHHCVIRGKSVFA 275
            ++  V ++ EG +LL +ACETAD+GM+ELLLQYGAN+NA+DSRGQT LH C+++G+S FA
Sbjct: 720  KEGQVMDNLEGCTLLHLACETADIGMVELLLQYGANVNASDSRGQTPLHRCILKGRSTFA 779

Query: 274  KLLLTRGANTQAVDREGRTPLQHAAKSSL-NDNELLSMLADTN 149
            +LLL+RGA+ +AVD +GRTP++ AA+S+   D E+ + L D+N
Sbjct: 780  RLLLSRGADPRAVDEQGRTPIELAAESNAGGDREVHAPLTDSN 822


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