BLASTX nr result

ID: Coptis25_contig00019123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019123
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   135   3e-30
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   135   4e-30
ref|XP_003634900.1| PREDICTED: uncharacterized protein LOC100854...   134   1e-29
ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13...   133   2e-29
emb|CBI35128.3| unnamed protein product [Vitis vinifera]              133   2e-29

>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 961

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/113 (53%), Positives = 82/113 (72%)
 Frame = +3

Query: 6   LPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMNRSF 185
           LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GSDYFD L+ RSF
Sbjct: 311 LPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGSDYFDELLLRSF 370

Query: 186 FQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFL 344
           FQ +    N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH + L
Sbjct: 371 FQRSKI--NSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARHAAVL 421


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  135 bits (340), Expect = 4e-30
 Identities = 61/113 (53%), Positives = 82/113 (72%)
 Frame = +3

Query: 6   LPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMNRSF 185
           LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GSDYFD L+ RSF
Sbjct: 404 LPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGSDYFDELLLRSF 463

Query: 186 FQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFL 344
           FQ   +  N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH + L
Sbjct: 464 FQR--SKFNSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARHAAVL 514


>ref|XP_003634900.1| PREDICTED: uncharacterized protein LOC100854556 [Vitis vinifera]
          Length = 2204

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/115 (52%), Positives = 88/115 (76%), Gaps = 2/115 (1%)
 Frame = +3

Query: 6   LPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMNRSF 185
           LPSHLKQCFAYCA+FPKGY+F K++L+L W+ +GF+  K  +RMED+GS YF  L++RSF
Sbjct: 428 LPSHLKQCFAYCAIFPKGYEFKKDELILLWMGEGFLQTKGKKRMEDLGSKYFSELLSRSF 487

Query: 186 FQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGME--VGDESHISRNVRHLSFL 344
           FQ++   S+  PR++MHDLIH+LA+ ++G+  F +E  + +  +I +  RHLSF+
Sbjct: 488 FQQS---SDVMPRFMMHDLIHDLAQSIAGNVSFNLEDKLENNENIFQKARHLSFI 539


>ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1308

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/116 (52%), Positives = 89/116 (76%), Gaps = 3/116 (2%)
 Frame = +3

Query: 6   LPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAG-RRMEDVGSDYFDNLMNRS 182
           LPSHLKQCFAYCA+FPKGY+F K++L+L W+ +GF+    G +RMED+GS YF  L++RS
Sbjct: 426 LPSHLKQCFAYCAIFPKGYEFKKDELILLWMGEGFLQQTKGKKRMEDLGSKYFSELLSRS 485

Query: 183 FFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGME--VGDESHISRNVRHLSFL 344
           FFQ++   S+  PR++MHDLIH+LA+ ++G+ CF +E  + +  +I +  RHLSF+
Sbjct: 486 FFQQS---SDIMPRFMMHDLIHDLAQSIAGNVCFNLEDKLENNENIFQKARHLSFI 538


>emb|CBI35128.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/116 (52%), Positives = 89/116 (76%), Gaps = 3/116 (2%)
 Frame = +3

Query: 6   LPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAG-RRMEDVGSDYFDNLMNRS 182
           LPSHLKQCFAYCA+FPKGY+F K++L+L W+ +GF+    G +RMED+GS YF  L++RS
Sbjct: 390 LPSHLKQCFAYCAIFPKGYEFKKDELILLWMGEGFLQQTKGKKRMEDLGSKYFSELLSRS 449

Query: 183 FFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGME--VGDESHISRNVRHLSFL 344
           FFQ++   S+  PR++MHDLIH+LA+ ++G+ CF +E  + +  +I +  RHLSF+
Sbjct: 450 FFQQS---SDIMPRFMMHDLIHDLAQSIAGNVCFNLEDKLENNENIFQKARHLSFI 502


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