BLASTX nr result

ID: Coptis25_contig00019120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019120
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274784.1| PREDICTED: probable calcium-binding protein ...   203   4e-50
emb|CAN73786.1| hypothetical protein VITISV_041123 [Vitis vinifera]   202   5e-50
ref|XP_002533274.1| Calmodulin, putative [Ricinus communis] gi|2...   200   2e-49
ref|XP_002283570.1| PREDICTED: probable calcium-binding protein ...   194   2e-47
emb|CAN64302.1| hypothetical protein VITISV_034922 [Vitis vinifera]   194   2e-47

>ref|XP_002274784.1| PREDICTED: probable calcium-binding protein CML41 [Vitis vinifera]
          Length = 186

 Score =  203 bits (516), Expect = 4e-50
 Identities = 101/157 (64%), Positives = 120/157 (76%)
 Frame = -2

Query: 680 SNPPPTIAMSPLPPPNIKLIKEDELQQVFWHFDSDGDGKISSLELRTYFGSIGEYMSHEE 501
           S+ PP+ + S  P  N K   EDEL+QVF HFDSDGDGKIS+LELR YFGSI EYMSHEE
Sbjct: 33  SSSPPSPSCSLQPKGNAK---EDELKQVFRHFDSDGDGKISALELRAYFGSIQEYMSHEE 89

Query: 500 AQSVINXXXXXXXXXXDFHDFMRLMMERGGSEDDIKRAFEMFEAEKGSGCITPKSLQRML 321
           AQ+ IN          DF DF++LM    G+++D+KRAFEMFE EKGSGCITPK LQRM 
Sbjct: 90  AQAAINDLDTDGDNLLDFQDFVKLMQREDGNQEDLKRAFEMFELEKGSGCITPKGLQRMF 149

Query: 320 NRLGDSKSFEECQAMIRVYDLDDNGILDFHEFHRMMA 210
           NRLGD KS++EC AMI+V+D+D NG+LDF EFH+MMA
Sbjct: 150 NRLGDEKSYDECVAMIQVFDIDGNGVLDFQEFHQMMA 186


>emb|CAN73786.1| hypothetical protein VITISV_041123 [Vitis vinifera]
          Length = 186

 Score =  202 bits (515), Expect = 5e-50
 Identities = 101/163 (61%), Positives = 121/163 (74%), Gaps = 5/163 (3%)
 Frame = -2

Query: 683 KSNPPPTIAMSPLPPPNIKL-----IKEDELQQVFWHFDSDGDGKISSLELRTYFGSIGE 519
           + +P  + A S  P P+  L      KEDEL+QVF HFDSDGDGKIS+LELR YFGSI E
Sbjct: 24  RRSPKSSSASSSPPSPSCSLQPKGDAKEDELKQVFRHFDSDGDGKISALELRAYFGSIQE 83

Query: 518 YMSHEEAQSVINXXXXXXXXXXDFHDFMRLMMERGGSEDDIKRAFEMFEAEKGSGCITPK 339
           YMSHEEAQ+ IN          DF DF++LM    G+++D+KRAFEMFE EKGSGCITPK
Sbjct: 84  YMSHEEAQAAINDLDTDGDNLLDFQDFVKLMQREDGNQEDLKRAFEMFELEKGSGCITPK 143

Query: 338 SLQRMLNRLGDSKSFEECQAMIRVYDLDDNGILDFHEFHRMMA 210
            LQRM NRLGD KS++EC AMI+V+D+D NG+LDF EFH+MMA
Sbjct: 144 GLQRMFNRLGDEKSYDECVAMIQVFDIDGNGVLDFQEFHQMMA 186


>ref|XP_002533274.1| Calmodulin, putative [Ricinus communis] gi|223526899|gb|EEF29106.1|
           Calmodulin, putative [Ricinus communis]
          Length = 198

 Score =  200 bits (509), Expect = 2e-49
 Identities = 99/160 (61%), Positives = 122/160 (76%), Gaps = 7/160 (4%)
 Frame = -2

Query: 668 PTIAMSPLPPPNIKLIKEDELQQVFWHFDSDGDGKISSLELRTYFGSIGEYMSHEEAQSV 489
           P   MSP  P N  L  EDEL++VF HFD+DGD K+S+LELR++FGS+GE+MSHEEA+SV
Sbjct: 39  PPSPMSPCTPKNNTLKVEDELKEVFRHFDTDGDEKVSALELRSFFGSVGEFMSHEEAESV 98

Query: 488 INXXXXXXXXXXDFHDFMRLMMERGGS-------EDDIKRAFEMFEAEKGSGCITPKSLQ 330
           IN          DF+DF++LM   G S       EDD+K+AFEMFE EKGSGCITPK LQ
Sbjct: 99  INDLDSDGDKLLDFNDFLKLMKREGNSNPNDQDHEDDLKKAFEMFEMEKGSGCITPKGLQ 158

Query: 329 RMLNRLGDSKSFEECQAMIRVYDLDDNGILDFHEFHRMMA 210
           RML+RLGDSKS++EC AMI V+D+D NG+LDFHEF++MMA
Sbjct: 159 RMLHRLGDSKSYDECVAMIHVFDIDGNGVLDFHEFYQMMA 198


>ref|XP_002283570.1| PREDICTED: probable calcium-binding protein CML41-like [Vitis
           vinifera]
          Length = 191

 Score =  194 bits (493), Expect = 2e-47
 Identities = 97/152 (63%), Positives = 113/152 (74%), Gaps = 5/152 (3%)
 Frame = -2

Query: 653 SPLPPPNI-----KLIKEDELQQVFWHFDSDGDGKISSLELRTYFGSIGEYMSHEEAQSV 489
           SP P P++     K  KEDEL+QVF +FDSDGDG+IS  ELR YF SIGE MSHEEAQ V
Sbjct: 39  SPCPSPSLVLGPKKSSKEDELRQVFGYFDSDGDGRISGEELRVYFQSIGESMSHEEAQKV 98

Query: 488 INXXXXXXXXXXDFHDFMRLMMERGGSEDDIKRAFEMFEAEKGSGCITPKSLQRMLNRLG 309
           I           +F DF+RLM +    +DD+KRAF+MFE EKG GCITPK LQ+M NRLG
Sbjct: 99  IGDFDVDGDSLLEFQDFVRLMEQSSEMDDDLKRAFQMFEVEKGCGCITPKGLQQMFNRLG 158

Query: 308 DSKSFEECQAMIRVYDLDDNGILDFHEFHRMM 213
           DSK++EEC AMIRV+DLD NG+LDFHEFHRMM
Sbjct: 159 DSKTYEECVAMIRVFDLDGNGVLDFHEFHRMM 190


>emb|CAN64302.1| hypothetical protein VITISV_034922 [Vitis vinifera]
          Length = 191

 Score =  194 bits (493), Expect = 2e-47
 Identities = 97/152 (63%), Positives = 113/152 (74%), Gaps = 5/152 (3%)
 Frame = -2

Query: 653 SPLPPPNI-----KLIKEDELQQVFWHFDSDGDGKISSLELRTYFGSIGEYMSHEEAQSV 489
           SP P P++     K  KEDEL+QVF +FDSDGDG+IS  ELR YF SIGE MSHEEAQ V
Sbjct: 39  SPCPSPSLVLGPKKSSKEDELRQVFGYFDSDGDGRISGEELRVYFQSIGESMSHEEAQKV 98

Query: 488 INXXXXXXXXXXDFHDFMRLMMERGGSEDDIKRAFEMFEAEKGSGCITPKSLQRMLNRLG 309
           I           +F DF+RLM +    +DD+KRAF+MFE EKG GCITPK LQ+M NRLG
Sbjct: 99  IGDFDVDGDSLLEFQDFVRLMEQXSEXDDDLKRAFQMFEVEKGCGCITPKGLQQMFNRLG 158

Query: 308 DSKSFEECQAMIRVYDLDDNGILDFHEFHRMM 213
           DSK++EEC AMIRV+DLD NG+LDFHEFHRMM
Sbjct: 159 DSKTYEECVAMIRVFDLDGNGVLDFHEFHRMM 190


Top