BLASTX nr result

ID: Coptis25_contig00019119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019119
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   125   3e-27
emb|CBI22195.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   113   2e-23
ref|XP_004147469.1| PREDICTED: uncharacterized protein LOC101204...   113   2e-23
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...   107   8e-22

>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
           vinifera]
          Length = 2223

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/112 (59%), Positives = 75/112 (66%)
 Frame = +3

Query: 3   VEIVEECLISVALDVASGLNVVALEVNNGSRPSPVAMEQCQEALSCLYYLLQRFPSKFTD 182
           VEIVEEC++ VALD+  GLN V  E N  SRPSP+ MEQCQEALSC+YYLLQRFPSKF+D
Sbjct: 155 VEIVEECVVLVALDIVFGLNGVVSETNGWSRPSPIVMEQCQEALSCMYYLLQRFPSKFSD 214

Query: 183 SKDIHGSLIPKDXXXXXXXXXXXXXXLKSASFSRDSLVAAGVAFCAALQLCL 338
           S    G     +              LKS +FSRD  VAAGVAFCAALQ CL
Sbjct: 215 SSGCVG-----ESSVLEMIVTAILSILKSLAFSRDCFVAAGVAFCAALQACL 261


>emb|CBI22195.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/112 (59%), Positives = 75/112 (66%)
 Frame = +3

Query: 3   VEIVEECLISVALDVASGLNVVALEVNNGSRPSPVAMEQCQEALSCLYYLLQRFPSKFTD 182
           VEIVEEC++ VALD+  GLN V  E N  SRPSP+ MEQCQEALSC+YYLLQRFPSKF+D
Sbjct: 155 VEIVEECVVLVALDIVFGLNGVVSETNGWSRPSPIVMEQCQEALSCMYYLLQRFPSKFSD 214

Query: 183 SKDIHGSLIPKDXXXXXXXXXXXXXXLKSASFSRDSLVAAGVAFCAALQLCL 338
           S    G     +              LKS +FSRD  VAAGVAFCAALQ CL
Sbjct: 215 SSGCVG-----ESSVLEMIVTAILSILKSLAFSRDCFVAAGVAFCAALQACL 261


>ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101204483
           [Cucumis sativus]
          Length = 2186

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/112 (50%), Positives = 74/112 (66%)
 Frame = +3

Query: 3   VEIVEECLISVALDVASGLNVVALEVNNGSRPSPVAMEQCQEALSCLYYLLQRFPSKFTD 182
           V+++++C + VA D+ S L+ V  E N  +RPSP+ MEQCQEALSCLYYLLQRFPSKF +
Sbjct: 155 VDVIKDCALLVARDIVSSLDYVVKETNESARPSPIIMEQCQEALSCLYYLLQRFPSKFQE 214

Query: 183 SKDIHGSLIPKDXXXXXXXXXXXXXXLKSASFSRDSLVAAGVAFCAALQLCL 338
              + G ++                 LKS +FSRD  VAAGV+FCA+LQ+CL
Sbjct: 215 DFGVLGMIVSS-----------ILSILKSLAFSRDCYVAAGVSFCASLQVCL 255


>ref|XP_004147469.1| PREDICTED: uncharacterized protein LOC101204483 [Cucumis sativus]
          Length = 2184

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/112 (50%), Positives = 74/112 (66%)
 Frame = +3

Query: 3   VEIVEECLISVALDVASGLNVVALEVNNGSRPSPVAMEQCQEALSCLYYLLQRFPSKFTD 182
           V+++++C + VA D+ S L+ V  E N  +RPSP+ MEQCQEALSCLYYLLQRFPSKF +
Sbjct: 155 VDVIKDCALLVARDIVSSLDYVVKETNESARPSPIIMEQCQEALSCLYYLLQRFPSKFQE 214

Query: 183 SKDIHGSLIPKDXXXXXXXXXXXXXXLKSASFSRDSLVAAGVAFCAALQLCL 338
              + G ++                 LKS +FSRD  VAAGV+FCA+LQ+CL
Sbjct: 215 DFGVLGMIVSS-----------ILSILKSLAFSRDCYVAAGVSFCASLQVCL 255


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
           gi|223543500|gb|EEF45031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2190

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +3

Query: 3   VEIVEECLISVALDVASGLNVVALEVNNGSRPSPVAMEQCQEALSCLYYLLQRFPSKFTD 182
           V+++E+C + VA DV  GL+ V LE+ + +RPSP+ MEQCQEALSC YYLLQRFP KF  
Sbjct: 132 VDVIEDCAVLVAWDVVLGLDSVLLEIQDWARPSPIVMEQCQEALSCSYYLLQRFPDKF-- 189

Query: 183 SKDIHGSLIPKDXXXXXXXXXXXXXXLKSASFSRDSLVAAGVAFCAALQLCL 338
            +D+ G     +              LKS +FSRD  VAAGV+ CAALQ+CL
Sbjct: 190 KEDLEG-FDGVEFNIMERILLVLISLLKSMAFSRDCFVAAGVSLCAALQVCL 240


Top