BLASTX nr result

ID: Coptis25_contig00019111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019111
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528011.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
ref|XP_002330785.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|XP_003635338.1| PREDICTED: uncharacterized protein At2g24330...   173   8e-41
ref|XP_003635100.1| PREDICTED: uncharacterized protein At2g24330...   173   8e-41
emb|CBI33045.3| unnamed protein product [Vitis vinifera]              173   8e-41

>ref|XP_002528011.1| conserved hypothetical protein [Ricinus communis]
           gi|223532637|gb|EEF34423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score =  176 bits (446), Expect(2) = 2e-42
 Identities = 95/189 (50%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
 Frame = +1

Query: 274 NYYV*FTL-QRYDPDPXXXXXXXXXXXXXXGMELGLKVYLDEESVRNNPVGKSNDSEFVL 450
           NYY    L QRYDPDP              G + GLKVY+ +E+  N P GKSND E+  
Sbjct: 159 NYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYVGDEAKLNTPTGKSNDVEYAQ 218

Query: 451 SKGIRNRKQSHCRSSSTGSGMLPQSMEEAPSDMGFNGVETPHNRNVVVEDH--PTPTVHD 624
           + G+RNRKQ   RSSS GS  +  S EE        G+ET  +  +VVE H     T+HD
Sbjct: 219 ASGLRNRKQVQTRSSSAGSSPVHHSNEEIICSPQSEGLETSEHNQLVVEHHNPQASTMHD 278

Query: 625 GGWIDRIAALLVGEDPTQSYALVRGSCHMHNWLARKDDFSLITYYCLHCHGLNCS*QVTS 804
           GGWI R+AALLVGEDPTQSYAL+ G+C MHN LARK+DF  ITYYC HCH LN   Q+  
Sbjct: 279 GGWIARLAALLVGEDPTQSYALICGNCRMHNGLARKEDFPYITYYCPHCHALNQPKQLEQ 338

Query: 805 NKCRSMLPV 831
               S  P+
Sbjct: 339 RGSGSNSPI 347



 Score = 23.5 bits (49), Expect(2) = 2e-42
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 144 RTNYYTTQQM 173
           +TNYYTTQQ+
Sbjct: 157 KTNYYTTQQL 166


>ref|XP_002330785.1| predicted protein [Populus trichocarpa] gi|222872587|gb|EEF09718.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  174 bits (441), Expect = 3e-41
 Identities = 90/166 (54%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
 Frame = +1

Query: 295 LQRYDPDPXXXXXXXXXXXXXXGMELGLKVYLDEESVRNNPVGKSNDSEFVLSKGIRNRK 474
           +QRYDPDP              G + GLKVY+ +ES    P GKSND+EFV + G+RNRK
Sbjct: 169 IQRYDPDPAAKAAAATVLASKLGADSGLKVYVGDESKPTLPTGKSNDAEFVQASGLRNRK 228

Query: 475 QSHCRSSSTGSGMLPQSMEEAPSDMGFNGVETPHNRNVVVEDHPTP---TVHDGGWIDRI 645
           Q H  SSS+GS ++  S EE P  +   G  T  +  +V E H TP   T +DGGW+ RI
Sbjct: 229 QVHTTSSSSGSTLVQHSDEEMPLSVQSEGPLTSEHNQLVAE-HYTPQGYTAYDGGWVARI 287

Query: 646 AALLVGEDPTQSYALVRGSCHMHNWLARKDDFSLITYYCLHCHGLN 783
           AALLVGEDPTQSYAL+ G+CHMHN LARK+DF  ITYYC HC  LN
Sbjct: 288 AALLVGEDPTQSYALICGNCHMHNGLARKEDFPYITYYCPHCRALN 333


>ref|XP_003635338.1| PREDICTED: uncharacterized protein At2g24330-like [Vitis vinifera]
          Length = 271

 Score =  173 bits (438), Expect = 8e-41
 Identities = 97/188 (51%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
 Frame = +1

Query: 274 NYYV*FTL-QRYDPDPXXXXXXXXXXXXXXGMELGLKVYLDEESVRNNPVGKSNDSEFVL 450
           NYY+   L QRYDPDP              G + GLKVY+ +E   N P GKSND E V 
Sbjct: 36  NYYITQQLIQRYDPDPAAKAAAATVLASKLGSDSGLKVYVGDEHQLNVPTGKSNDVEVVQ 95

Query: 451 SKGIRNRKQSHCRSSSTGSGMLPQSMEEAPSDMGFNGVETPHNRNVVVEDHPTPTV--HD 624
           S G+RNRKQ   RSS+ GS  L  S +E P + G  G     +  +VVE H       HD
Sbjct: 96  SSGMRNRKQLQTRSSNPGSPALHHS-DEIPHNAGAEGPGISEHDQLVVEHHTHNGAAHHD 154

Query: 625 GGWIDRIAALLVGEDPTQSYALVRGSCHMHNWLARKDDFSLITYYCLHCHGLNCS*QVTS 804
           GGWI RIAALLVGEDPT+SYAL+ G+CHMHN LARK+DF  +TYYC HCH LN S Q   
Sbjct: 155 GGWIARIAALLVGEDPTESYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQSKQAEE 214

Query: 805 NKCRSMLP 828
           +  RS  P
Sbjct: 215 HASRSNSP 222


>ref|XP_003635100.1| PREDICTED: uncharacterized protein At2g24330-like [Vitis vinifera]
          Length = 575

 Score =  173 bits (438), Expect = 8e-41
 Identities = 97/188 (51%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
 Frame = +1

Query: 274 NYYV*FTL-QRYDPDPXXXXXXXXXXXXXXGMELGLKVYLDEESVRNNPVGKSNDSEFVL 450
           NYY+   L QRYDPDP              G + GLKVY+ +E   N P GKSND E V 
Sbjct: 340 NYYITQQLIQRYDPDPAAKAAAATVLASKLGSDSGLKVYVGDEHQLNVPTGKSNDVEVVQ 399

Query: 451 SKGIRNRKQSHCRSSSTGSGMLPQSMEEAPSDMGFNGVETPHNRNVVVEDHPTPTV--HD 624
           S G+RNRKQ   RSS+ GS  L  S +E P + G  G     +  +VVE H       HD
Sbjct: 400 SSGMRNRKQLQTRSSNPGSPALHHS-DEIPHNAGAEGPGISEHDQLVVEHHTHNGAAHHD 458

Query: 625 GGWIDRIAALLVGEDPTQSYALVRGSCHMHNWLARKDDFSLITYYCLHCHGLNCS*QVTS 804
           GGWI RIAALLVGEDPT+SYAL+ G+CHMHN LARK+DF  +TYYC HCH LN S Q   
Sbjct: 459 GGWIARIAALLVGEDPTESYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQSKQAEE 518

Query: 805 NKCRSMLP 828
           +  RS  P
Sbjct: 519 HASRSNSP 526


>emb|CBI33045.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  173 bits (438), Expect = 8e-41
 Identities = 97/188 (51%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
 Frame = +1

Query: 274 NYYV*FTL-QRYDPDPXXXXXXXXXXXXXXGMELGLKVYLDEESVRNNPVGKSNDSEFVL 450
           NYY+   L QRYDPDP              G + GLKVY+ +E   N P GKSND E V 
Sbjct: 90  NYYITQQLIQRYDPDPAAKAAAATVLASKLGSDSGLKVYVGDEHQLNVPTGKSNDVEVVQ 149

Query: 451 SKGIRNRKQSHCRSSSTGSGMLPQSMEEAPSDMGFNGVETPHNRNVVVEDHPTPTV--HD 624
           S G+RNRKQ   RSS+ GS  L  S +E P + G  G     +  +VVE H       HD
Sbjct: 150 SSGMRNRKQLQTRSSNPGSPALHHS-DEIPHNAGAEGPGISEHDQLVVEHHTHNGAAHHD 208

Query: 625 GGWIDRIAALLVGEDPTQSYALVRGSCHMHNWLARKDDFSLITYYCLHCHGLNCS*QVTS 804
           GGWI RIAALLVGEDPT+SYAL+ G+CHMHN LARK+DF  +TYYC HCH LN S Q   
Sbjct: 209 GGWIARIAALLVGEDPTESYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQSKQAEE 268

Query: 805 NKCRSMLP 828
           +  RS  P
Sbjct: 269 HASRSNSP 276


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