BLASTX nr result

ID: Coptis25_contig00019110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019110
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisom...   217   9e-55
emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]   217   9e-55
ref|XP_002863374.1| hypothetical protein ARALYDRAFT_494276 [Arab...   213   1e-53
gb|AAO00734.1| Lon protease homolog 1 precursor [Arabidopsis tha...   213   2e-53

>ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|222870300|gb|EEF07431.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/112 (95%), Positives = 109/112 (97%)
 Frame = -2

Query: 338 VYLELLADLPWQNASEEHELDLRAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 159
           VYLELLADLPWQ  SEEHELDL+AAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV
Sbjct: 350 VYLELLADLPWQTVSEEHELDLKAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 409

Query: 158 LCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMP 3
           LCFVGPPGVGKTSLASSIAAAL RKFVRISLGG+KDEADIRGHRRTYIGSMP
Sbjct: 410 LCFVGPPGVGKTSLASSIAAALGRKFVRISLGGIKDEADIRGHRRTYIGSMP 461


>ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisomal [Vitis vinifera]
           gi|297742183|emb|CBI33970.3| unnamed protein product
           [Vitis vinifera]
          Length = 888

 Score =  217 bits (552), Expect = 9e-55
 Identities = 107/112 (95%), Positives = 110/112 (98%)
 Frame = -2

Query: 338 VYLELLADLPWQNASEEHELDLRAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 159
           VYLELLADLPWQ ASEEHELDLRAAKERLD+DHYGLVK+KQRIIEYLAVRKLKPDARGPV
Sbjct: 345 VYLELLADLPWQKASEEHELDLRAAKERLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPV 404

Query: 158 LCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMP 3
           LCFVGPPGVGKTSLASSIA+AL RKFVRISLGGVKDEADIRGHRRTYIGSMP
Sbjct: 405 LCFVGPPGVGKTSLASSIASALGRKFVRISLGGVKDEADIRGHRRTYIGSMP 456


>emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]
          Length = 904

 Score =  217 bits (552), Expect = 9e-55
 Identities = 107/112 (95%), Positives = 110/112 (98%)
 Frame = -2

Query: 338 VYLELLADLPWQNASEEHELDLRAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 159
           VYLELLADLPWQ ASEEHELDLRAAKERLD+DHYGLVK+KQRIIEYLAVRKLKPDARGPV
Sbjct: 361 VYLELLADLPWQKASEEHELDLRAAKERLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPV 420

Query: 158 LCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMP 3
           LCFVGPPGVGKTSLASSIA+AL RKFVRISLGGVKDEADIRGHRRTYIGSMP
Sbjct: 421 LCFVGPPGVGKTSLASSIASALGRKFVRISLGGVKDEADIRGHRRTYIGSMP 472


>ref|XP_002863374.1| hypothetical protein ARALYDRAFT_494276 [Arabidopsis lyrata subsp.
           lyrata] gi|297309209|gb|EFH39633.1| hypothetical protein
           ARALYDRAFT_494276 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/112 (92%), Positives = 109/112 (97%)
 Frame = -2

Query: 338 VYLELLADLPWQNASEEHELDLRAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 159
           VYLELLADLPW+ ASEEHELDL+AAKERLD+DHYGL K+KQRIIEYLAVRKLKPDARGPV
Sbjct: 344 VYLELLADLPWEKASEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPV 403

Query: 158 LCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMP 3
           LCFVGPPGVGKTSLASSIAAAL RKFVR+SLGGVKDEADIRGHRRTYIGSMP
Sbjct: 404 LCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMP 455


>gb|AAO00734.1| Lon protease homolog 1 precursor [Arabidopsis thaliana]
           gi|34098905|gb|AAQ56835.1| At5g47040 [Arabidopsis
           thaliana]
          Length = 557

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/112 (92%), Positives = 108/112 (96%)
 Frame = -2

Query: 338 VYLELLADLPWQNASEEHELDLRAAKERLDNDHYGLVKIKQRIIEYLAVRKLKPDARGPV 159
           VYLELLADLPW  ASEEHELDL+AAKERLD+DHYGL K+KQRIIEYLAVRKLKPDARGPV
Sbjct: 13  VYLELLADLPWDKASEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPV 72

Query: 158 LCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMP 3
           LCFVGPPGVGKTSLASSIAAAL RKFVR+SLGGVKDEADIRGHRRTYIGSMP
Sbjct: 73  LCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMP 124


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