BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019107
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             332   5e-89
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             332   5e-89
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   317   3e-84
emb|CAN76262.1| hypothetical protein VITISV_000565 [Vitis vinifera]   313   2e-83
emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera]   311   8e-83

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  332 bits (852), Expect = 5e-89
 Identities = 158/269 (58%), Positives = 202/269 (75%)
 Frame = -3

Query: 812  DQLVDQTCGHELLSFMDAYSGYNQIPLANEDQEKTSFITEQGIYCYNVLPFGLKNAGATY 633
            D+LV+ T G+ LLSFMDA+SGYNQI +  +DQEKTSF+T++G YCY V+ FGLKNAGATY
Sbjct: 899  DRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATY 958

Query: 632  QRLVTDMFKDMLGDTMEVYIDDMVVKSKKAGDHLTHLEQAFSRLRRTGMKLNPEKCLFGA 453
            QR V  M  D +G T+EVYIDDM+VKS K  DH+ HL + F  L   GMKLNP KC FG 
Sbjct: 959  QRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGV 1018

Query: 452  SSGKFLGYQVSQRGIEANPDQIRAFLDMPDPRTKKQIQKLSGMVAALNRFISRASDKCRP 273
            +SG+FLGY V++RGIEANP QIRA L++P PR  +++Q+L+G +AALNRFISR++DKC P
Sbjct: 1019 TSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLP 1078

Query: 272  FLQLLKKGEPFSWSDQCHHAFATLKEYLTTPPVLAKPVHGETLGLYLAVSDFAISSVLFK 93
            F  LLK+   F W      AF  LK+YL+TPP+L KP  GETL LY+AVSD A+SSVL +
Sbjct: 1079 FYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVR 1138

Query: 92   EENNSEKPIYFTSKTLTPAEKNYSFLERA 6
            E+   ++PI++TSK+L  AE  Y  +E+A
Sbjct: 1139 EDRGEQRPIFYTSKSLVEAETRYPVIEKA 1167


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  332 bits (852), Expect = 5e-89
 Identities = 160/268 (59%), Positives = 205/268 (76%)
 Frame = -3

Query: 812 DQLVDQTCGHELLSFMDAYSGYNQIPLANEDQEKTSFITEQGIYCYNVLPFGLKNAGATY 633
           D+LV+ T G+ELL+FMDA+SG NQI +  EDQEKTSFIT++GIYCY V+PFGLKNAGATY
Sbjct: 96  DRLVESTAGNELLTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATY 155

Query: 632 QRLVTDMFKDMLGDTMEVYIDDMVVKSKKAGDHLTHLEQAFSRLRRTGMKLNPEKCLFGA 453
           QRLV  MF + LG TMEVYIDDM+VKS K  DH+ HLE+ F  L +  MKLNP KC FG 
Sbjct: 156 QRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGV 215

Query: 452 SSGKFLGYQVSQRGIEANPDQIRAFLDMPDPRTKKQIQKLSGMVAALNRFISRASDKCRP 273
            SG+FLGY V++RGIEAN +QI AFL+MP PR  K++Q+L+G +AALNRFISR++DK  P
Sbjct: 216 PSGEFLGYIVTERGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTDKSLP 275

Query: 272 FLQLLKKGEPFSWSDQCHHAFATLKEYLTTPPVLAKPVHGETLGLYLAVSDFAISSVLFK 93
           F Q+LK  + F W ++C  AF  LK YLTTPP+L+KP   E L LY++VS+ A+S VL +
Sbjct: 276 FYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVR 335

Query: 92  EENNSEKPIYFTSKTLTPAEKNYSFLER 9
           E+   +KPIY+ SK++T  E  Y+ +E+
Sbjct: 336 EDRGEQKPIYYVSKSMTDPETRYTMMEK 363


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  317 bits (811), Expect = 3e-84
 Identities = 151/251 (60%), Positives = 194/251 (77%)
 Frame = -3

Query: 812  DQLVDQTCGHELLSFMDAYSGYNQIPLANEDQEKTSFITEQGIYCYNVLPFGLKNAGATY 633
            D+LV+ T G+ELLSFMDA+SGYNQI +  EDQEKT FIT++GIYCY V+PFGL+NAGATY
Sbjct: 539  DRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATY 598

Query: 632  QRLVTDMFKDMLGDTMEVYIDDMVVKSKKAGDHLTHLEQAFSRLRRTGMKLNPEKCLFGA 453
             RLV  MF + +G TMEVYIDDM++KS K  DH+ HLE+ F+ L +  MKLNP KC FG 
Sbjct: 599  PRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGV 658

Query: 452  SSGKFLGYQVSQRGIEANPDQIRAFLDMPDPRTKKQIQKLSGMVAALNRFISRASDKCRP 273
             SG+FLGY V++RGIEANP+QI AFL+MP P+  K++Q+L+G +AALNRFISR++DK  P
Sbjct: 659  PSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFISRSTDKSLP 718

Query: 272  FLQLLKKGEPFSWSDQCHHAFATLKEYLTTPPVLAKPVHGETLGLYLAVSDFAISSVLFK 93
            F Q+LK  + F W ++C  AF  LK YLT+PPVL KP   E L LY++VS+ A+S VL +
Sbjct: 719  FYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVSNHAVSGVLIR 778

Query: 92   EENNSEKPIYF 60
            E+   +KPIY+
Sbjct: 779  EDRGEQKPIYY 789


>emb|CAN76262.1| hypothetical protein VITISV_000565 [Vitis vinifera]
          Length = 935

 Score =  313 bits (803), Expect = 2e-83
 Identities = 146/268 (54%), Positives = 199/268 (74%), Gaps = 1/268 (0%)
 Frame = -3

Query: 812 DQLVDQTCGHELLSFMDAYSGYNQIPLANEDQEKTSFITEQGIYCYNVLPFGLKNAGATY 633
           DQ+VD T G  +LSF+DA+SGY+QIP++ +D+EKT+FIT  G+YCY V+PFGLKNAGATY
Sbjct: 96  DQIVDSTSGQGMLSFLDAFSGYHQIPMSPDDEEKTAFITPHGLYCYKVMPFGLKNAGATY 155

Query: 632 QRLVTDMFKDMLGDTMEVYIDDMVVKSKKAGDHLTHLEQAFSRLRRTGMKLNPEKCLFGA 453
           QRL+T +FK ++G T+EVYIDD+VVKSK    H+ HL++ F  LR+ GMKLNP KC FG 
Sbjct: 156 QRLMTKIFKPLIGHTVEVYIDDIVVKSKTREQHVIHLQEVFHPLRKYGMKLNPSKCAFGV 215

Query: 452 SSGKFLGYQVSQRGIEANPDQIRAFLDMPDPRTKKQIQKLSGMVAALNRFISRASDKCRP 273
           S+GKFLG+ V QRGIE +PDQ++A ++ P PR KK++Q+L+G + AL RFI+R +D+ RP
Sbjct: 216 SAGKFLGFMVIQRGIEVSPDQVKAVMETPPPRNKKELQRLTGKLVALGRFIARFTDELRP 275

Query: 272 FLQLLKKGEPFSWSDQCHHAFATLKEYLTTPPVLAKPVHGETLGLYLAVSDFAISSVLFK 93
           F   ++K     W+D C  AFA +K  L  PP+L+ P+  E L +YLAVS++AIS+VLF+
Sbjct: 276 FFLAIRKAGAHGWTDSCQSAFAKIKHCLMQPPILSSPIPKEKLYMYLAVSEWAISAVLFR 335

Query: 92  -EENNSEKPIYFTSKTLTPAEKNYSFLE 12
               N +KPIY+ S+ L   E  YS +E
Sbjct: 336 CPSPNEQKPIYYVSRALADVETRYSKME 363


>emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera]
          Length = 987

 Score =  311 bits (798), Expect = 8e-83
 Identities = 146/268 (54%), Positives = 198/268 (73%), Gaps = 1/268 (0%)
 Frame = -3

Query: 812 DQLVDQTCGHELLSFMDAYSGYNQIPLANEDQEKTSFITEQGIYCYNVLPFGLKNAGATY 633
           DQ+VD T G  +LSF+DA+SGYNQIP++ +D+EKTSFIT   +YCY V+PFGLKNAGATY
Sbjct: 96  DQIVDSTSGQGMLSFLDAFSGYNQIPMSLDDEEKTSFITPHDLYCYKVMPFGLKNAGATY 155

Query: 632 QRLVTDMFKDMLGDTMEVYIDDMVVKSKKAGDHLTHLEQAFSRLRRTGMKLNPEKCLFGA 453
           QRL+T +FK ++G T+EVYIDD+VVKSK    H+ HL++ F  LR+ GMKLNP KC FG 
Sbjct: 156 QRLMTKIFKPLIGHTIEVYIDDIVVKSKTREQHVLHLQKVFHLLRKYGMKLNPSKCAFGV 215

Query: 452 SSGKFLGYQVSQRGIEANPDQIRAFLDMPDPRTKKQIQKLSGMVAALNRFISRASDKCRP 273
           S+GKFLG+ VSQRGIE +PDQ++A ++ P PR KK++Q+L+G + AL RFI+R +D+ RP
Sbjct: 216 SAGKFLGFMVSQRGIEVSPDQVKAVMETPPPRNKKELQRLTGKLVALGRFIARFTDELRP 275

Query: 272 FLQLLKKGEPFSWSDQCHHAFATLKEYLTTPPVLAKPVHGETLGLYLAVSDFAISSVLFK 93
           F   ++K     W+D C +AF  +K  L  PP+L+ P+  E L +YLAVS++AIS+VLF+
Sbjct: 276 FFLAIRKAGAHGWTDSCQNAFEKIKHCLRQPPILSSPIPKEKLYMYLAVSEWAISAVLFR 335

Query: 92  -EENNSEKPIYFTSKTLTPAEKNYSFLE 12
                 +KPIY+ S+ L   E  YS +E
Sbjct: 336 CPSPKEQKPIYYVSRALANVETRYSKME 363