BLASTX nr result

ID: Coptis25_contig00019097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019097
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297715.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002297710.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...    82   4e-14
ref|XP_002525570.1| conserved hypothetical protein [Ricinus comm...    82   4e-14
gb|AFK44987.1| unknown [Lotus japonicus]                               82   6e-14

>ref|XP_002297715.1| predicted protein [Populus trichocarpa]
           gi|224053186|ref|XP_002297717.1| predicted protein
           [Populus trichocarpa] gi|222844973|gb|EEE82520.1|
           predicted protein [Populus trichocarpa]
           gi|222844975|gb|EEE82522.1| predicted protein [Populus
           trichocarpa]
          Length = 386

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/110 (37%), Positives = 63/110 (57%)
 Frame = -1

Query: 335 NLKDKMGKNIALLQDHGMPKSLISKLIIKNPRVLYLESNKLNASVLELKNMGFSPSSNVI 156
           N    +  N   L   G+P   ++KLI+  PR L ++ +++   V  +KN+G  P + V 
Sbjct: 180 NFNSALKPNTVFLIKEGVPHDRVAKLILMYPRTLQMKPDRMVRVVNSVKNLGLEPKAPVF 239

Query: 155 VSGIRVFVGIRKPIWDAKLEAYKSFGWSEDEVLSMFKKNPFVMAVSVKKI 6
           V  +RV +G+ +  W  K+E  KS GW+EDEVL  FK+NP ++A S  KI
Sbjct: 240 VHALRVMIGMSESTWKRKIEYMKSLGWTEDEVLLTFKRNPDILACSEDKI 289


>ref|XP_002297710.1| predicted protein [Populus trichocarpa]
           gi|224053150|ref|XP_002297712.1| predicted protein
           [Populus trichocarpa] gi|222844968|gb|EEE82515.1|
           predicted protein [Populus trichocarpa]
           gi|222844970|gb|EEE82517.1| predicted protein [Populus
           trichocarpa]
          Length = 371

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/111 (35%), Positives = 68/111 (61%)
 Frame = -1

Query: 335 NLKDKMGKNIALLQDHGMPKSLISKLIIKNPRVLYLESNKLNASVLELKNMGFSPSSNVI 156
           + K  +  NI  L   G+P   ++KL++  PR + ++ +++ ++   LKN+G  P + + 
Sbjct: 169 SFKSCVQPNIDFLIKEGLPLDKMAKLLMSYPRTILIKHDRMVSAANYLKNLGLEPKAPMF 228

Query: 155 VSGIRVFVGIRKPIWDAKLEAYKSFGWSEDEVLSMFKKNPFVMAVSVKKIN 3
           +   RV V + +P W  K+EA+KS GWSE E+L  FK+ PF+++ S +KIN
Sbjct: 229 IHAFRVMVQLSEPTWKKKIEAWKSVGWSEGEILGTFKRFPFLLSCSEEKIN 279


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/102 (39%), Positives = 64/102 (62%)
 Frame = -1

Query: 311 NIALLQDHGMPKSLISKLIIKNPRVLYLESNKLNASVLELKNMGFSPSSNVIVSGIRVFV 132
           NI  LQ+ G+P+S I  LI   P V+ L+ ++   +V ++  MGF P + V +  I+VF 
Sbjct: 202 NITALQEIGVPESSIVFLITYYPIVVQLKHDRFGETVKKVMEMGFDPLTVVFIKAIQVFG 261

Query: 131 GIRKPIWDAKLEAYKSFGWSEDEVLSMFKKNPFVMAVSVKKI 6
           G+ K  W+ K+E Y+ +GWS DE++ +F+  P  M++S KKI
Sbjct: 262 GMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPACMSLSEKKI 303


>ref|XP_002525570.1| conserved hypothetical protein [Ricinus communis]
           gi|223535149|gb|EEF36829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 38/110 (34%), Positives = 64/110 (58%)
 Frame = -1

Query: 335 NLKDKMGKNIALLQDHGMPKSLISKLIIKNPRVLYLESNKLNASVLELKNMGFSPSSNVI 156
           +LK  M  N+  L   G+P   I K+I+  PR +  + +++  +V  +KN+G  P S + 
Sbjct: 132 DLKGTMQPNVEFLLKEGVPAYGIEKMILLQPRAIMQKHDRMVYAVNAVKNLGLEPKSRMF 191

Query: 155 VSGIRVFVGIRKPIWDAKLEAYKSFGWSEDEVLSMFKKNPFVMAVSVKKI 6
           +  +RV + + +  W  K E  KS GW+E+E+LS FK++P  +A S +KI
Sbjct: 192 IHAVRVIISMSELTWKKKFEMMKSMGWNEEEILSAFKRDPLCLACSEEKI 241


>gb|AFK44987.1| unknown [Lotus japonicus]
          Length = 387

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/108 (40%), Positives = 67/108 (62%)
 Frame = -1

Query: 326 DKMGKNIALLQDHGMPKSLISKLIIKNPRVLYLESNKLNASVLELKNMGFSPSSNVIVSG 147
           D+M   + LL + G+  S I +L+   P VL  +   L  +V+E+K +GF PS +  VS 
Sbjct: 193 DRMKSKVKLLLNMGVTPSNIHQLLTTWPSVL--KCADLKEAVVEVKGLGFHPSKSHFVSA 250

Query: 146 IRVFVGIRKPIWDAKLEAYKSFGWSEDEVLSMFKKNPFVMAVSVKKIN 3
           +RV  GI K  WDAKL+A+K++G  ED +L  F++ P +M  S+KK+N
Sbjct: 251 LRVKRGISKSPWDAKLDAFKTWGCPEDAILDAFRRYPHMMLYSIKKVN 298


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