BLASTX nr result
ID: Coptis25_contig00019084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019084
(693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vi... 93 2e-40
ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-40
ref|XP_004139279.1| PREDICTED: NEDD8 ultimate buster 1-like [Cuc... 96 1e-37
ref|XP_004173432.1| PREDICTED: LOW QUALITY PROTEIN: NEDD8 ultima... 96 5e-37
ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus com... 82 1e-36
>ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vinifera]
gi|296084548|emb|CBI25569.3| unnamed protein product
[Vitis vinifera]
Length = 552
Score = 92.8 bits (229), Expect(3) = 2e-40
Identities = 41/69 (59%), Positives = 55/69 (79%)
Frame = +2
Query: 2 CDTELLYSIDNVPILQIDTVWCYFMLRDMKWLSTAGARLAKARKGLQWSHTEDLARFRAL 181
C+ +++ +DNVPILQID VWCYFMLRD++WLS AG RLAKAR+G++ SH +D +R R L
Sbjct: 178 CNPKVIELVDNVPILQIDMVWCYFMLRDIRWLSEAGIRLAKAREGIERSHGKDASRVRVL 237
Query: 182 EKDCHPELA 208
+ +PELA
Sbjct: 238 QNGRYPELA 246
Score = 60.5 bits (145), Expect(3) = 2e-40
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +1
Query: 328 YVRLELLEGVVAYHNRRFDKCRKALTSAHSKYLQLQVQYEDLSELMSTG 474
++RLELLEGVV++H+ +F+K +K LTSA +KY QLQV E LS LMS G
Sbjct: 248 HLRLELLEGVVSFHSGQFEKSKKVLTSAQAKYFQLQVPDEALSLLMSMG 296
Score = 59.7 bits (143), Expect(3) = 2e-40
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 14/87 (16%)
Frame = +3
Query: 474 GYNEQEARRALRMNNQNVDLAVKFLVRQKEKGEQTLKEDSLGKSKI-------MVHFKKP 632
GY E+ ++RALRM+NQ +DLA+ FLV +K K E+ +ED +++I M +K
Sbjct: 296 GYKERNSKRALRMSNQQLDLAIDFLVEEKAKKEKKREEDIQRRNEIMEQKRYGMTPLRKA 355
Query: 633 LDLE-------IRYKKDVAVEALQRSE 692
+DL+ I ++K++A EAL+R+E
Sbjct: 356 VDLQSLHMLVSIGFEKELAAEALRRNE 382
>ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|222872941|gb|EEF10072.1|
predicted protein [Populus trichocarpa]
Length = 566
Score = 88.6 bits (218), Expect(3) = 4e-40
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +2
Query: 2 CDTELLYSIDNVPILQIDTVWCYFMLRDMKWLSTAGARLAKARKGLQWSHTEDLARFRAL 181
C+ + + +DN+PILQID VWCYFML+D+ WLS AG RL KAR+GL+ +H +D +RFR L
Sbjct: 181 CNPKSIELVDNIPILQIDMVWCYFMLQDIAWLSVAGLRLEKAREGLERAHGKDSSRFRLL 240
Query: 182 EKDCHPELA 208
+ C ELA
Sbjct: 241 QAGCSSELA 249
Score = 64.7 bits (156), Expect(3) = 4e-40
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 328 YVRLELLEGVVAYHNRRFDKCRKALTSAHSKYLQLQVQYEDLSELMSTG 474
Y+RLELLEGVVAYH+ +FDK RK LTSA +K+ QLQV E LS +MS G
Sbjct: 251 YLRLELLEGVVAYHSGQFDKSRKFLTSAQAKFFQLQVPDEALSVVMSIG 299
Score = 58.5 bits (140), Expect(3) = 4e-40
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 14/87 (16%)
Frame = +3
Query: 474 GYNEQEARRALRMNNQNVDLAVKFLVRQKEKGEQTLKEDSLGKSKI-------MVHFKKP 632
G+ EQ+A+RALRM+NQ+V AV FLV ++EK EQ ++D +++I + KK
Sbjct: 299 GFGEQDAKRALRMSNQDVQSAVNFLVLEREKREQKREDDIRRRNEIKQQKRYGVTPLKKA 358
Query: 633 LDLE-------IRYKKDVAVEALQRSE 692
+DL+ I ++K++A EAL+++E
Sbjct: 359 VDLQKLTELVSIGFEKELAAEALRKNE 385
>ref|XP_004139279.1| PREDICTED: NEDD8 ultimate buster 1-like [Cucumis sativus]
Length = 556
Score = 95.5 bits (236), Expect(3) = 1e-37
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +2
Query: 2 CDTELLYSIDNVPILQIDTVWCYFMLRDMKWLSTAGARLAKARKGLQWSHTEDLARFRAL 181
C+ +L+ +DNV ILQID VWCYFML+D+KWLS AG RLAKAR+G++ +H +D +R R L
Sbjct: 180 CNPKLIEFVDNVSILQIDMVWCYFMLKDIKWLSDAGLRLAKAREGIERAHGKDSSRVRIL 239
Query: 182 EKDCHPELA 208
+ CHPELA
Sbjct: 240 QAGCHPELA 248
Score = 60.1 bits (144), Expect(3) = 1e-37
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +1
Query: 328 YVRLELLEGVVAYHNRRFDKCRKALTSAHSKYLQLQVQYEDLSELMSTG 474
++RLELLEGV AYH+ RFDK R+A+ SA +KY QLQV + LS +M G
Sbjct: 250 HLRLELLEGVAAYHSCRFDKSREAINSARAKYFQLQVSDKALSHVMDMG 298
Score = 47.8 bits (112), Expect(3) = 1e-37
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Frame = +3
Query: 474 GYNEQEARRALRMNNQNVDLAVKFLVRQKEKGEQTLKEDSLGKSKI-------MVHFKKP 632
G+ E+EA+RALRM Q+V AV FL ++ + E+ +ED + +I M KK
Sbjct: 298 GFKEKEAKRALRMCYQDVCKAVDFLFEERTRRERKREEDVRRQEEIMEQKLYGMTPSKKA 357
Query: 633 LDLE-------IRYKKDVAVEALQRSE 692
++L+ I Y+K++A EAL+R+E
Sbjct: 358 VNLQILEKLASIGYEKELAAEALRRNE 384
>ref|XP_004173432.1| PREDICTED: LOW QUALITY PROTEIN: NEDD8 ultimate buster 1-like,
partial [Cucumis sativus]
Length = 382
Score = 95.5 bits (236), Expect(3) = 5e-37
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +2
Query: 2 CDTELLYSIDNVPILQIDTVWCYFMLRDMKWLSTAGARLAKARKGLQWSHTEDLARFRAL 181
C+ +L+ +DNV ILQID VWCYFML+D+KWLS AG RLAKAR+G++ +H +D +R R L
Sbjct: 79 CNPKLIEFVDNVSILQIDMVWCYFMLKDIKWLSDAGLRLAKAREGIERAHGKDSSRVRIL 138
Query: 182 EKDCHPELA 208
+ CHPELA
Sbjct: 139 QAGCHPELA 147
Score = 58.2 bits (139), Expect(3) = 5e-37
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 328 YVRLELLEGVVAYHNRRFDKCRKALTSAHSKYLQLQVQYEDLSELMSTG 474
++RLELLEG AYH+ RFDK R+A+ SA +KY QLQV + LS +M G
Sbjct: 149 HLRLELLEGXAAYHSCRFDKSREAINSARAKYFQLQVSDKALSHVMDMG 197
Score = 47.8 bits (112), Expect(3) = 5e-37
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Frame = +3
Query: 474 GYNEQEARRALRMNNQNVDLAVKFLVRQKEKGEQTLKEDSLGKSKI-------MVHFKKP 632
G+ E+EA+RALRM Q+V AV FL ++ + E+ +ED + +I M KK
Sbjct: 197 GFKEKEAKRALRMCYQDVCKAVDFLFEERTRRERKREEDVRRQEEIMEQKLYGMTPSKKA 256
Query: 633 LDLE-------IRYKKDVAVEALQRSE 692
++L+ I Y+K++A EAL+R+E
Sbjct: 257 VNLQILEKLASIGYEKELAAEALRRNE 283
>ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus communis]
gi|223527979|gb|EEF30062.1| NEDD8 ultimate buster,
putative [Ricinus communis]
Length = 559
Score = 81.6 bits (200), Expect(3) = 1e-36
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2
Query: 2 CDTELLYSIDNVPILQIDTVWCYFMLRDMKWLSTAGARLAKARKGLQWSHTEDLARFRAL 181
C+ + + +DN+ ILQID VWCYFMLRD+ WLS AG RL KAR+GL+ +H +D +RFR L
Sbjct: 183 CNPKSIELVDNISILQIDMVWCYFMLRDIAWLSVAGVRLEKAREGLERAHGKDSSRFRLL 242
Query: 182 EKDCHPELA 208
+ EL+
Sbjct: 243 QAGRSSELS 251
Score = 63.9 bits (154), Expect(3) = 1e-36
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = +1
Query: 328 YVRLELLEGVVAYHNRRFDKCRKALTSAHSKYLQLQVQYEDLSELMSTGATMN 486
Y+RLELLEGVVAYH+ +FDKCRK LTSA ++ QL+V E LS +M G N
Sbjct: 253 YLRLELLEGVVAYHSGQFDKCRKYLTSAQERFFQLRVPDEALSIVMGMGFKEN 305
Score = 54.7 bits (130), Expect(3) = 1e-36
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 14/87 (16%)
Frame = +3
Query: 474 GYNEQEARRALRMNNQNVDLAVKFLVRQKEKGEQTLKEDSLGKSKIM-------VHFKKP 632
G+ E +A+RALRM+NQ+++ A+ FLV +KE+ + +++D +++I KK
Sbjct: 301 GFKENDAKRALRMSNQDIESAINFLVEEKERKAKKMEDDIRRRAEIREQRRYGETALKKA 360
Query: 633 LDLE-------IRYKKDVAVEALQRSE 692
+DL+ + ++K++A EAL+R+E
Sbjct: 361 VDLQRLKELVSLGFEKELAAEALRRNE 387