BLASTX nr result

ID: Coptis25_contig00019065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019065
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243...    69   9e-10
ref|XP_002530671.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243925 [Vitis vinifera]
          Length = 396

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 49/131 (37%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
 Frame = +1

Query: 7   QQNYPPQQNFSSTPAGPGDGRGTGVQLNSVPQSYIPQQNYGPVPVGQQT--------GGR 162
           +Q  PP  N  S     GDG   G      PQ+Y PQQNYGP   G           GGR
Sbjct: 221 RQGNPPYDNRGSMQ---GDGGNYGA-----PQNYPPQQNYGPAGQGPMPMSNRDYAHGGR 272

Query: 163 ETYQAERREPMPSYQRDFPQVGRGDNMPPENRDDYRFNYSHRRPGLLEGQRYPRTEQRDG 342
           +TYQ ERR+ MP YQ ++ Q  +G+  P E RD   F+   +R        Y   +QRD 
Sbjct: 273 DTYQGERRDTMPPYQGNYNQGQQGNYHPQERRD---FSQGAQR-------NYAPPDQRD- 321

Query: 343 MQGGEQQNFNP 375
              G+ +N+NP
Sbjct: 322 -VRGDNRNYNP 331


>ref|XP_002530671.1| conserved hypothetical protein [Ricinus communis]
           gi|223529764|gb|EEF31702.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 55/161 (34%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
 Frame = +1

Query: 7   QQNYPPQQNFSSTPAGPGDGRGTGVQLNSVPQSYIPQQNYGPVPVGQQTG-GRETYQAER 183
           QQNYPPQQN+      P        Q    PQ+Y PQQNYGP   G++       +QA R
Sbjct: 245 QQNYPPQQNYGPPQNFPPQ------QNYGSPQNYPPQQNYGPPGQGERMPMNSGNHQANR 298

Query: 184 REP-------------MPSYQRDFPQVG----RGD--NMPPENRD------------DYR 270
             P              P  Q  FPQ G    RGD  N  P + +               
Sbjct: 299 GGPHQGNYNQGQQGNQYPQDQSGFPQGGQRDFRGDNRNFSPSHAETCGQGTNAGYGQGTN 358

Query: 271 FNYSHRRPGLLEGQRYPRTEQRDGMQGGEQQNFNPPMGQMR 393
             Y    PG  EG R+ + EQR+    GEQ N+  PMGQ R
Sbjct: 359 AGYGQGYPG--EGPRFSQMEQRNIQ--GEQANYT-PMGQTR 394


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