BLASTX nr result

ID: Coptis25_contig00019053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019053
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439080.1| hypothetical protein SORBIDRAFT_10g031220 [S...   391   e-106
ref|NP_001130789.1| uncharacterized protein LOC100191893 [Zea ma...   389   e-105
dbj|BAJ99055.1| predicted protein [Hordeum vulgare subsp. vulgar...   385   e-104
dbj|BAD62500.1| putative lysine ketoglutarate reductase trans-sp...   385   e-104
ref|NP_001058667.1| Os06g0731900 [Oryza sativa Japonica Group] g...   384   e-104

>ref|XP_002439080.1| hypothetical protein SORBIDRAFT_10g031220 [Sorghum bicolor]
            gi|241917303|gb|EER90447.1| hypothetical protein
            SORBIDRAFT_10g031220 [Sorghum bicolor]
          Length = 380

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/353 (56%), Positives = 236/353 (66%), Gaps = 31/353 (8%)
 Frame = -3

Query: 1257 KLQYEHFKIER---------------------RWDYYLGRRRA-GSSLLPRGIVQSTSDL 1144
            ++QY+H K++                      RW     R+ A G+  LPRGIVQ  SD+
Sbjct: 28   QIQYQHLKVDLGKAGFASATQENNAIPSRNRIRWGTARTRKAATGADSLPRGIVQRHSDM 87

Query: 1143 QLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMVKKFLSVNSSILLFHYDGN 964
             LRPLW     S    +     SALLA+ VG+ Q +NVDTM +KFL  N +++LFHYDGN
Sbjct: 88   SLRPLWEDDAAS-THKNKNGDHSALLAMAVGISQIKNVDTMARKFLKENYAVMLFHYDGN 146

Query: 963  VDAWNDLDWSNKAIHILAQNQTKXXXXXXXXXXXXXXXXXXXXXXXXXXX--------FL 808
            VD W  L+WS+KAIHILA NQTK                                   +L
Sbjct: 147  VDGWRHLEWSDKAIHILAHNQTKWWFAKRFLHPDVMAIYDFIFLWDEDLGVESFNPRRYL 206

Query: 807  QTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYAVQGSLNCSEESTGPPCTG 631
              M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y  + S+NCS+ES GPPCTG
Sbjct: 207  DIMVSEGLEITQPALDPDLSTDIHHRITIRNKMTKVHRRIYDNRPSMNCSDESKGPPCTG 266

Query: 630  WIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDRTEKVGVIDSEYIVHHGV 451
            W+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDMK+GYCAQGDRTEKVGVIDSEY+VH G+
Sbjct: 267  WVEGMAPVFSRAAWKCVWHLIQNDLIHGWGLDMKLGYCAQGDRTEKVGVIDSEYVVHQGI 326

Query: 450  PSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAVREDEGWADPFD 292
            PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AVREDEGW DPFD
Sbjct: 327  PSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVREDEGWKDPFD 379


>ref|NP_001130789.1| uncharacterized protein LOC100191893 [Zea mays]
            gi|194690118|gb|ACF79143.1| unknown [Zea mays]
            gi|195614762|gb|ACG29211.1| lysine ketoglutarate
            reductase trans-splicing related 1 [Zea mays]
            gi|238010772|gb|ACR36421.1| unknown [Zea mays]
            gi|413935102|gb|AFW69653.1| lysine ketoglutarate
            reductase trans-splicing 1 [Zea mays]
          Length = 372

 Score =  389 bits (998), Expect = e-105
 Identities = 194/320 (60%), Positives = 225/320 (70%), Gaps = 9/320 (2%)
 Frame = -3

Query: 1224 RWDYYLGRRRAGSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLK 1045
            RW    G  R G+  LPRGIV   SD+ LRPLW     S    +     SALLA+ VG+ 
Sbjct: 57   RW----GPDRNGAHSLPRGIVHRHSDMSLRPLWEDDTAS-THKNKNSDYSALLAMAVGIS 111

Query: 1044 QKRNVDTMVKKFLSVNSSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKXXXXXXXXXX 865
            Q +N+DTM +KFL  N +++LFHYDGNVD W  L+WS+KAIHILA NQTK          
Sbjct: 112  QIKNIDTMARKFLKENYAVMLFHYDGNVDGWRHLEWSDKAIHILAHNQTKWWFAKRFLHP 171

Query: 864  XXXXXXXXXXXXXXXXX--------FLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKK 712
                                     +L  M+SEGLEI QPALDPDLS ++HHRITIRNK 
Sbjct: 172  DVMAIYDFIFLWDEDLGVENFNPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKM 231

Query: 711  EKVHRRVYAVQGSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDM 532
             KVHRR+Y  + S+NCS+ES GPPCTGW+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDM
Sbjct: 232  AKVHRRIYDNRPSMNCSDESKGPPCTGWVEGMAPVFSRTAWKCVWHLIQNDLIHGWGLDM 291

Query: 531  KIGYCAQGDRTEKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEV 352
            K+GYCAQGDRTEKVGVIDSEY+VH G+PSLGG S +     RSLDLRTHIRRQS AELE 
Sbjct: 292  KLGYCAQGDRTEKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEK 351

Query: 351  FRQRWDQAVREDEGWADPFD 292
            F++RW++AVREDEGW DPFD
Sbjct: 352  FKERWNRAVREDEGWRDPFD 371


>dbj|BAJ99055.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326506814|dbj|BAJ91448.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 388

 Score =  385 bits (990), Expect = e-104
 Identities = 187/320 (58%), Positives = 229/320 (71%), Gaps = 9/320 (2%)
 Frame = -3

Query: 1224 RWDYYLGRRRAGSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLK 1045
            RW+     RR G+  LPRGIV+++SD+ LRPLW S+       +  ++  ALLA+ VG+ 
Sbjct: 73   RWN-----RRTGAEGLPRGIVETSSDMFLRPLWDSTAKHASAKNKHDQHKALLAMAVGIS 127

Query: 1044 QKRNVDTMVKKFLSVNSSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKXXXXXXXXXX 865
            Q +NVD M +KFL+ + +++LFHYDGNVD W  L+WS+KAIHILA NQTK          
Sbjct: 128  QMQNVDIMARKFLNESYTVMLFHYDGNVDGWRSLEWSDKAIHILAPNQTKWWFAKRFLHP 187

Query: 864  XXXXXXXXXXXXXXXXX--------FLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKK 712
                                     ++  M+SEGLEI QPALDPDLS ++HHRITIRNK 
Sbjct: 188  SVVAIYDFIFLWDEDLGVENFDPRRYIDIMVSEGLEITQPALDPDLSTDIHHRITIRNKL 247

Query: 711  EKVHRRVYAVQGSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDM 532
             KVHRRVY  + S+NCS++S GPPCTGW+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDM
Sbjct: 248  TKVHRRVYDNRSSMNCSDDSRGPPCTGWVEGMAPVFSRAAWKCVWHLIQNDLIHGWGLDM 307

Query: 531  KIGYCAQGDRTEKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEV 352
            K+GYCAQGDR EKVGVIDSEY+VH G+PSLGG S       RS+DLRTHIRRQS AELE+
Sbjct: 308  KLGYCAQGDRAEKVGVIDSEYVVHQGIPSLGGPSDTSKLPRRSMDLRTHIRRQSSAELEM 367

Query: 351  FRQRWDQAVREDEGWADPFD 292
            F++RW++AVRED+ W DPFD
Sbjct: 368  FKERWEKAVREDDEWMDPFD 387


>dbj|BAD62500.1| putative lysine ketoglutarate reductase trans-splicing related 1
            [Oryza sativa Japonica Group]
            gi|215706940|dbj|BAG93400.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 359

 Score =  385 bits (988), Expect = e-104
 Identities = 190/310 (61%), Positives = 225/310 (72%), Gaps = 8/310 (2%)
 Frame = -3

Query: 1197 RAGSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMV 1018
            R G+  LPRGIV S SD+ LRPLW S      ++D     +ALLA+ VG+ Q +NVD M 
Sbjct: 52   RTGAEGLPRGIVHSNSDMYLRPLWDSGANPKNKND---NHNALLAMAVGISQMQNVDIMA 108

Query: 1017 KKFLSVNSSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKXXXXXXXXXXXXXXXXXXX 838
            +KFL+ N +++LFHYDGNVD W++L+WS+KAIHILA+NQTK                   
Sbjct: 109  RKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWFAKRFLHPDVVAIYGFIF 168

Query: 837  XXXXXXXX-------FLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYAV 682
                           +L  M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y  
Sbjct: 169  LWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKMMKVHRRIYDN 228

Query: 681  QGSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDR 502
            + S+NCS+ S GPPCTGW+EGMAPVFSR AWRCVWHLIQNDLIHGWGLDMK+GYCAQGDR
Sbjct: 229  RASMNCSDGSKGPPCTGWVEGMAPVFSRAAWRCVWHLIQNDLIHGWGLDMKLGYCAQGDR 288

Query: 501  TEKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAVR 322
             EKVGVIDSEY+VH G+PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AVR
Sbjct: 289  AEKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVR 348

Query: 321  EDEGWADPFD 292
            EDE W DPFD
Sbjct: 349  EDEEWTDPFD 358


>ref|NP_001058667.1| Os06g0731900 [Oryza sativa Japonica Group]
            gi|54291575|dbj|BAD62499.1| putative lysine ketoglutarate
            reductase trans-splicing related 1 [Oryza sativa Japonica
            Group] gi|113596707|dbj|BAF20581.1| Os06g0731900 [Oryza
            sativa Japonica Group] gi|215693852|dbj|BAG89051.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 360

 Score =  384 bits (987), Expect = e-104
 Identities = 190/311 (61%), Positives = 225/311 (72%), Gaps = 9/311 (2%)
 Frame = -3

Query: 1197 RAGSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMV 1018
            R G+  LPRGIV S SD+ LRPLW S      ++D     +ALLA+ VG+ Q +NVD M 
Sbjct: 52   RTGAEGLPRGIVHSNSDMYLRPLWDSGANPKNKND---NHNALLAMAVGISQMQNVDIMA 108

Query: 1017 KKFLSVNSSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKXXXXXXXXXXXXXXXXXXX 838
            +KFL+ N +++LFHYDGNVD W++L+WS+KAIHILA+NQTK                   
Sbjct: 109  RKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPDVVAIYGFI 168

Query: 837  XXXXXXXX--------FLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYA 685
                            +L  M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y 
Sbjct: 169  FLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKMMKVHRRIYD 228

Query: 684  VQGSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGD 505
             + S+NCS+ S GPPCTGW+EGMAPVFSR AWRCVWHLIQNDLIHGWGLDMK+GYCAQGD
Sbjct: 229  NRASMNCSDGSKGPPCTGWVEGMAPVFSRAAWRCVWHLIQNDLIHGWGLDMKLGYCAQGD 288

Query: 504  RTEKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAV 325
            R EKVGVIDSEY+VH G+PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AV
Sbjct: 289  RAEKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAV 348

Query: 324  REDEGWADPFD 292
            REDE W DPFD
Sbjct: 349  REDEEWTDPFD 359


Top