BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019044
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    57   5e-06
ref|XP_003571397.1| PREDICTED: putative F-box/LRR-repeat protein...    57   9e-06
gb|EAZ05890.1| hypothetical protein OsI_28128 [Oryza sativa Indi...    57   9e-06

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 30/103 (29%), Positives = 54/103 (52%)
 Frame = +1

Query: 175 EGRSKVKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDL 354
           +  S+ +   +R+W++L  D+   I ++L   +I+  A   CSFW K+ +EP +WR++D+
Sbjct: 7   DSTSREEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDM 66

Query: 355 SCFDFIEEKDVSPGPFIRLVVTRSQGSITSITFPLDASSDDLL 483
                + +         R  V RS G + SI    D ++D+LL
Sbjct: 67  HNLGDLCDLGYDLEEMARHAVDRSGGQLLSICID-DFATDNLL 108


>ref|XP_003571397.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Brachypodium
           distachyon]
          Length = 291

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +1

Query: 190 VKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDLSCFDF 369
           V+    R W +L  D+L S++A+L   D+++GA L C  W + +K P+LWR +D+   + 
Sbjct: 21  VQPDTARDWSELPLDVLASVFAKLGAVDVLMGAGLVCHSWLEAAKVPNLWRYIDMEHHEV 80

Query: 370 IEEKDVSPGPFI----RLVVTRSQGSITSITFPLDASSDDLLVVAE 495
           +  K       +    +  V RS G +         + + L+ +AE
Sbjct: 81  LRGKKKKKRDVLCAMAKTAVDRSDGQLEVFAGSEFVTDELLMYIAE 126


>gb|EAZ05890.1| hypothetical protein OsI_28128 [Oryza sativa Indica Group]
          Length = 338

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 187 KVKATMKRSWEDLDGDILLSIYARLCVTDIILGASLCCSFWYKVSKEPSLWRDVDLSCFD 366
           ++ A  +R W +L  D L  I+A++   +I++GA L C  W + +K P LWR +D++   
Sbjct: 7   RLPAPDERDWSELPVDALSVIFAKIGAIEILMGAGLVCHSWLEAAKVPDLWRSLDMTRHK 66

Query: 367 FIEEKDVS-PGPFIRLVVTRSQGSITSITFPLDASSDDLLVVAE 495
            I +K +       R+ V RS G + S       +SD L  + E
Sbjct: 67  VIFKKTIGVMCAMARVAVDRSAGKLESFWAQNFVTSDLLKYIGE 110